Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g00590 ATGCTTTTTTTTCAAAAGGTAGTTGATGATCGTATGAACTTCCACAAGGCAACTTCTGGAAATGAAGAAAACATTGTTGATGTTTTGTTGAGAATGAAGAGAGATGGCTTTCAATCTGATGCACTCATCCTTACTCAAGATTGCATTAAAGCACTAATCATGGATATCTTTCTAGCAGGAGTGGAAACCGGAGCAAACACCATCGTTTGGGCAATGACAGAGCTAATTAGAAGCCCAAGAGTAATGAAAAAGCTACAAGACCATATCAAAAGTCACATAAAAGAAGATCGAGTAAAAGAAATCGACCTTGAAAAGCTTCCATATCTAAAAATGGTAGTGAAAGAGGTTTTAAGGTTGCATCCACCGGCCCCACTTCTACTACCAAGAGAAACCATGTCACATTTTAAGCTCAATGGTTATGATATACATCCCAAGACTCATCTTCATGTCAATGTATGGGCCATTGGGCGAGATCCAGAGTGTTGGGTTAACCCCGAAAAGTTTTTTCCAGAAAGGTATATGGAAAGTAATATTAATTATATAGGACAAAACTATGAGTTATTACCTTTTGGAGGTGGTAGAAGAGTTTGTCCAGGAATGAATATGGGAATCTTTACAATAGAGTTGACATTGGCTAATTTGTTACATTGTTTTGATTGGAAATTGGCAGATGGAATGAAAGAAGAAGATGTGGATATGGAAGAGGATTTTGGTCTTGCTATTGCCAAAAAAGCACCTCTTAAACTTGTTCCTATGCCTTACTTAAACTAG 771 37.22 MLFFQKVVDDRMNFHKATSGNEENIVDVLLRMKRDGFQSDALILTQDCIKALIMDIFLAGVETGANTIVWAMTELIRSPRVMKKLQDHIKSHIKEDRVKEIDLEKLPYLKMVVKEVLRLHPPAPLLLPRETMSHFKLNGYDIHPKTHLHVNVWAIGRDPECWVNPEKFFPERYMESNINYIGQNYELLPFGGGRRVCPGMNMGIFTIELTLANLLHCFDWKLADGMKEEDVDMEEDFGLAIAKKAPLKLVPMPYLN 256
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3788946 3791024 - MELO3C011934.2.1 Cme10g00590 339476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g00590 256 Gene3D Cytochrome P450 1 254 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00590 256 PANTHER CYTOCHROME P450 71B11-RELATED 3 253 - -
Cme10g00590 256 SUPERFAMILY Cytochrome P450 3 252 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00590 256 PRINTS P450 superfamily signature 188 197 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00590 256 PRINTS P450 superfamily signature 111 122 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00590 256 PRINTS P450 superfamily signature 59 76 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00590 256 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 190 199 IPR017972 GO:0005506|GO:0016705
Cme10g00590 256 PANTHER CYTOCHROME P450 71B16-RELATED 3 253 - -
Cme10g00590 256 PRINTS E-class P450 group I signature 68 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00590 256 PRINTS E-class P450 group I signature 110 128 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00590 256 PRINTS E-class P450 group I signature 187 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00590 256 PRINTS E-class P450 group I signature 197 220 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00590 256 PRINTS E-class P450 group I signature 151 175 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00590 256 PRINTS E-class P450 group I signature 48 65 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00590 256 Pfam Cytochrome P450 6 240 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme10g00590 Cme-Chr10:3788946 Cme10g00594 Cme-Chr10:3794363 5.00E-173 dispersed
Cme10g00589 Cme-Chr10:3782419 Cme10g00590 Cme-Chr10:3788946 4.08E-06 tandem
Cme10g00590 Cme-Chr10:3788946 Cme12g01642 Cme-Chr12:23549666 1.22E-87 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g00590 - - cmo:103488952 519.62