Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g00594 ATGCGTAGAGCAGTTGACGCCATCAAAAGCTTTTCGATTACCGATTTCTTTCCGAGATTCGGTTGGATTGTTGATCGAATCAGTGGTGTCCATGGGAAGTTGGAGAAGAGCTTTGGTGAGATGGATGCTTTTTTTCAAAAGGTAGTTGATGATCGTATGAACTTCCACAATGCAACTTCTGGAAATGAAGAAAACATTGTCGATGTTCTGTTGAAAATGAAGAGAGATGGCTTTCAATCTGATGAACTCATCCTTACTCAAGATTGCATTAAAGCACTAATCATGGATATTTTTCTAGCAGGAGTAGACACAGGAGCAGGCACCATTGTTTGGGCAATGGTAGAGCTAATTAGAAACCCAAGAGTAATGAAAAAGCTACAAGATCATATCAGAAGCCACATAAAAAAAGATCAAGTAAAAGAAATGGACCTCGAAAGGCTTCCATATCTAAAAATGGTAGTGAAAGAGGTTCTAAGGTTGCATTCACCAGCCCCACTTCTCCTTCCAAGAGAAACCACGTCCCATTTTAAGCTCAATGGCTATGATATACGTCCCAAGACTCATCTTCATGTCAATGTATGGGCCATTGGACGAGATCCAGAGTGTTGGGTTAACCCTGAAAAGTTTTTTCCAGAAAGGTTTATGGAAAGTAATATTGATTATAAAGGACAGGACTATGAGTTATTACCTTTTGGAGGTGGTAGAAGAATTTGTCCAGGAATAAATATGGCAACCATTACGATAGAGTTGACATTGGCTAATTTGTTACATTGTTTTGATTGGAAATTAGTGGATGGAATGAAAGAAGAAGATGTAGATATGGAAGAGGATTTTGGTCTTACTGTTGCCAAAAAATCACCTCTTAAACTTGTTCCCATCCCTTACTTAAGCTAG 894 38.7 MRRAVDAIKSFSITDFFPRFGWIVDRISGVHGKLEKSFGEMDAFFQKVVDDRMNFHNATSGNEENIVDVLLKMKRDGFQSDELILTQDCIKALIMDIFLAGVDTGAGTIVWAMVELIRNPRVMKKLQDHIRSHIKKDQVKEMDLERLPYLKMVVKEVLRLHSPAPLLLPRETTSHFKLNGYDIRPKTHLHVNVWAIGRDPECWVNPEKFFPERFMESNIDYKGQDYELLPFGGGRRICPGINMATITIELTLANLLHCFDWKLVDGMKEEDVDMEEDFGLTVAKKSPLKLVPIPYLS 297
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3794363 3796130 - MELO3C011931.2.1 Cme10g00594 339480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g00594 297 PRINTS E-class P450 group I signature 228 238 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00594 297 PRINTS E-class P450 group I signature 109 135 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00594 297 PRINTS E-class P450 group I signature 89 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00594 297 PRINTS E-class P450 group I signature 151 169 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00594 297 PRINTS E-class P450 group I signature 192 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00594 297 PRINTS E-class P450 group I signature 238 261 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00594 297 PANTHER CYTOCHROME P450 71B16-RELATED 3 294 - -
Cme10g00594 297 Pfam Cytochrome P450 17 281 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00594 297 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 231 240 IPR017972 GO:0005506|GO:0016705
Cme10g00594 297 Gene3D Cytochrome P450 1 291 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00594 297 PRINTS P450 superfamily signature 100 117 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00594 297 PRINTS P450 superfamily signature 152 163 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00594 297 PRINTS P450 superfamily signature 238 249 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00594 297 PRINTS P450 superfamily signature 229 238 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00594 297 SUPERFAMILY Cytochrome P450 7 294 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00594 297 PANTHER CYTOCHROME P450 71B11-RELATED 3 294 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme10g00590 Cme-Chr10:3788946 Cme10g00594 Cme-Chr10:3794363 5.00E-173 dispersed
Cme10g00594 Cme-Chr10:3794363 Cme10g00599 Cme-Chr10:3817059 1.23E-147 dispersed
Cme10g00592 Cme-Chr10:3793023 Cme10g00594 Cme-Chr10:3794363 2.03E-38 proximal
Cme10g00593 Cme-Chr10:3793441 Cme10g00594 Cme-Chr10:3794363 2.06E-19 tandem
Cme10g00594 Cme-Chr10:3794363 Cme10g00595 Cme-Chr10:3799636 2.37E-143 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g00594 - - cmo:103489547 609.372