Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g00595 ATGATGATGAATAGCGTTTTCATTTGGCTTCCTCTCCTCTTTCTCTTAACAAAAAAGCTTCTTAAGAAGAAAAACAACAACCTTGTTAATAATCCTCCTCCAAGCCCTCCAAAGCTTCCTTTGTTAGGTCATTTACACCTCCTTGGCTCCCACCCTCATCGCTCTTTATACAATCTTTCACAAACACATGGCCCCATCATGCTCCTGAAACTCGGCTCCGTCCCAACCATCGCCATCTCTTCTGCATCAGCCGCAAGAGAGCTATTCAGACAGCACGATCTCGCATCTTGCAGCCGCCCTCGCTTAACGGGAAGTGGAAGATTTTCCTACAACTTTCAAGACCTGAATTTATCCCCATACGGGGAGCGTTGGAGAGAGCTTCGAAAGATTTTCATACTCGAGCTCTTTAGTACTAAACGAGTGCAATCATTCCATCATATAAGAGAAGAGGAAATTGATAAGCTATTAAACTGCATATCTAATTCCTCATCTCTTGGAACTCCAATCGATTTGGCTCAAACCTCATATGCTCTCACTGCAAATGTAACCTTTAGGATTGCTTTTGGGAAAAGGTTTAGTGGGGGAGAATTAGATAATGAGAATTTTCAACATATTATTCGTAGATCAATGGTTGCATTGGGAAGCTTTTTTGCGACTGATTATTTCCCTTGTGTGGGTTGGATTGTTGATTGGATTAGTGGTGTTAATGGGACATTGGAGAAGAGTTTTGGTGAAATGGATGCAATTTTTCAAAAAGTGGTCGATGATCGAATCAAGTTCAAGGAAAGTTGTCGATCAAGTGAAGAAAATATTGTTGATGTTTTGTTGAGAATGGAGAGAGATAGCTCCGAATTACATGCTGTGAAATTTACACACGAGTGTGTTAAGGCACTTATCATGGATATATTTCTAGCAGGAGTAGAAACAGGAGAAAACAGCATAATTTGGGCCATGGCAGAGCTGATTAAAAATCCAAGAGTGATGAAAAAGCTACAAGATGAGATCAGAAGCACCATTAAAGAAGATCGAGTGAAGGAGAGTGATCTCGAAAAGCTTCAATATCTAAAAATGGTGGTGAAAGAAGTTCTAAGGCTTCATCCACCAGTCCCACTTTTGTTACCTAGAGAAAGCATGTCACATTTTAAGCTAAATGGTTATGATATTCATCCAAAAACTCACATTCATGTGAATGCATGGGCAATTGGAAGAGACCCAGAATCTTGGAAACACCCACTACAGTTTATTCCAGAAAGGTTTATAGAAAATAATATTGACTATAAAGGACAACATTTTGAGTTAATTCCATTTGGAGCTGGTCGAAGGATTTGTCCGGGGATGAATATGGGGATTATTATCGTGGAACTTGCATTGGCAAACATGTTGCTGTGTTTTGATTGGAAATTGCCAAATGGAATGAAGGAAGAAGATGTGGATATGGAAGAAGATGCTGGTCTTTCAGCTTCCAAGAAACTGCCTCTTCAACTTATTCCAATCCGTTACTCGAGTTGA 1509 39.89 MMMNSVFIWLPLLFLLTKKLLKKKNNNLVNNPPPSPPKLPLLGHLHLLGSHPHRSLYNLSQTHGPIMLLKLGSVPTIAISSASAARELFRQHDLASCSRPRLTGSGRFSYNFQDLNLSPYGERWRELRKIFILELFSTKRVQSFHHIREEEIDKLLNCISNSSSLGTPIDLAQTSYALTANVTFRIAFGKRFSGGELDNENFQHIIRRSMVALGSFFATDYFPCVGWIVDWISGVNGTLEKSFGEMDAIFQKVVDDRIKFKESCRSSEENIVDVLLRMERDSSELHAVKFTHECVKALIMDIFLAGVETGENSIIWAMAELIKNPRVMKKLQDEIRSTIKEDRVKESDLEKLQYLKMVVKEVLRLHPPVPLLLPRESMSHFKLNGYDIHPKTHIHVNAWAIGRDPESWKHPLQFIPERFIENNIDYKGQHFELIPFGAGRRICPGMNMGIIIVELALANMLLCFDWKLPNGMKEEDVDMEEDAGLSASKKLPLQLIPIRYSS 502
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3799636 3802016 - MELO3C011930.2.1 Cme10g00595 339481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g00595 502 SUPERFAMILY Cytochrome P450 33 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00595 502 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00595 502 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00595 502 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00595 502 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00595 502 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00595 502 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00595 502 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00595 502 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00595 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Cme10g00595 502 Gene3D Cytochrome P450 18 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00595 502 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00595 502 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00595 502 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00595 502 PANTHER CYTOCHROME P450 71B11-RELATED 5 499 - -
Cme10g00595 502 Pfam Cytochrome P450 33 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00595 502 PANTHER CYTOCHROME P450 71B16-RELATED 5 499 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme10g00589 Cme-Chr10:3782419 Cme10g00595 Cme-Chr10:3799636 2.11E-07 dispersed
Cme10g00595 Cme-Chr10:3799636 Cme10g00599 Cme-Chr10:3817059 0 dispersed
Cme10g00598 Cme-Chr10:3814447 Cme10g00595 Cme-Chr10:3799636 1.26E-53 dispersed
Cme10g00591 Cme-Chr10:3791009 Cme10g00595 Cme-Chr10:3799636 5.20E-39 proximal
Cme10g00594 Cme-Chr10:3794363 Cme10g00595 Cme-Chr10:3799636 2.37E-143 tandem
Cme10g00595 Cme-Chr10:3799636 Cme10g00596 Cme-Chr10:3804018 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g00595 - K01773 csv:116401644 825.854