Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g00597 ATGTCTCTTCTTCCCCTCATCTTGTTATCCTCTCTACTTCTATTGATCATCTTAAAATGGATGAAAAATAGAAATAGAAAAAAGGGGAATTTTCCTCCAAGTCCACCAAAGCTTCCAATCATAGGAAACTTGCACCAACTTGGCAAGCTCCCACATAAATCTCTATGGCATCTCTCTCAGCTTTATGGCCCCATCATAAGCCTCAACCTCGGCGGCATTCAAACCATCATCATCTCTTCTGCTGATGCCGCCCGTGGCTTTTTAAAAACACACGACCTTCAAACCTGCAGTCGACCACAAACCGAAAGTGCCCGAAAACTCACTCACGACTTCCATGACATTGCGTTTTCCCCGTATGGCGATTACTGGCGAGAGGTGAGAAAGGTTTGCGTTCTTGAGCTTTTTAGTCTCAAGAGACTAAAATCTTACCAACCCATTATAGAACATGAAATGAATTCGCTTATCGAATCGATTTCGGAATCAGCTTCTTGTGGGGATGTTGTTGATCTTACTGAAAAGTCCATGGCTTTCACGGCTGCTATTATCTTTCGGATAGCTTTTGGGAAGAAGGTTTGTAAAGGAGATGGATTTCATGAGGTTGTGAATGAAGCTGAGGCTTTGTTGGGAAGTTATAGTGCATATGAATTGTTTCCTAATCTTGTGGGTAAAGCTATTGAGTGGTTTAGTGGATATCAAAAAAGGCTTAACAAGGTTTATAATGAGTTGAATAGTTTGTTTCAAGAAGTGATTGATGAACATCTTTGTGTTGGGAGAGATCACGAAGCTAAGGAAGATGATATTATTGATGTGCTTTTGGGACTTGGCGAAAAGCAAGATCAATCAGCTTCTTCCAATCTTTCTATTACTCATGACCATATCAAAGGCATTCTTTTGAACATATTTTTGGGAGGACTAGACACAAGTTCCATAACAATAGTATGGGCAATGGCAGAACTAGCAAAGAAACCAAAACTAATGAAGAAAGCTCAACAAGAAATCAGAAGCCACATGAAAAACAACAGAGGGAACATAACAGACAAAGAAATAGAGCAGTGTCAATATCTTAAAATGATAGTGAAAGAGACACTAAGACTGCATCCACCAGCACCCCTTCTTCTTCCAAGACAAGTCATGTCCCATTTCGAAATGGAAGGCTTCGACTTTTACCCGAAGATGATGGTTCAAATCAATGCTTGGGCAATTGCAAGAGACCCCAAATGCTGGAAAGACCCCGAGGAATTCATACCAGAGAGATTTGCAGGCAGCTGCATTGATTTCAGAGGACAGCATTTCGAGTTGCTGCCGTTCGGGGCCGGGCGGAGGATTTGTCCGGCGATAAATTTGGGGATCAAGAATGTGGAGGTTGCTTTGGCAAATCTTTTGTATCATTTTGATTGGAAGTTGCCGGAAGGGATGAAGGAAGAGGATTTGGATATGGAAGAGAGTTTGGGGTTTAGTCTCACTATTTACAAGAAGTTGCCTCTTAAACTTGTCCCTCTTCCATACATTCCATAA 1515 41.45 MSLLPLILLSSLLLLIILKWMKNRNRKKGNFPPSPPKLPIIGNLHQLGKLPHKSLWHLSQLYGPIISLNLGGIQTIIISSADAARGFLKTHDLQTCSRPQTESARKLTHDFHDIAFSPYGDYWREVRKVCVLELFSLKRLKSYQPIIEHEMNSLIESISESASCGDVVDLTEKSMAFTAAIIFRIAFGKKVCKGDGFHEVVNEAEALLGSYSAYELFPNLVGKAIEWFSGYQKRLNKVYNELNSLFQEVIDEHLCVGRDHEAKEDDIIDVLLGLGEKQDQSASSNLSITHDHIKGILLNIFLGGLDTSSITIVWAMAELAKKPKLMKKAQQEIRSHMKNNRGNITDKEIEQCQYLKMIVKETLRLHPPAPLLLPRQVMSHFEMEGFDFYPKMMVQINAWAIARDPKCWKDPEEFIPERFAGSCIDFRGQHFELLPFGAGRRICPAINLGIKNVEVALANLLYHFDWKLPEGMKEEDLDMEESLGFSLTIYKKLPLKLVPLPYIP 504
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3808996 3811261 - MELO3C011928.2.1 Cme10g00597 339483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g00597 504 Pfam Cytochrome P450 32 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00597 504 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00597 504 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00597 504 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00597 504 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00597 504 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00597 504 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00597 504 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00597 504 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00597 504 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00597 504 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00597 504 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00597 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Cme10g00597 504 Gene3D Cytochrome P450 16 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00597 504 PANTHER CYTOCHROME P450 71B11-RELATED 15 501 - -
Cme10g00597 504 PANTHER CYTOCHROME P450 15 501 - -
Cme10g00597 504 SUPERFAMILY Cytochrome P450 24 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme10g00597 Cme-Chr10:3808996 Cme10g00599 Cme-Chr10:3817059 1.63E-155 dispersed
Cme10g00596 Cme-Chr10:3804018 Cme10g00597 Cme-Chr10:3808996 5.62E-151 tandem
Cme10g00597 Cme-Chr10:3808996 Cme10g00598 Cme-Chr10:3814447 9.71E-40 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g00597 - K01773 csv:101216461 862.448