Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g00599 ATGTTTAGCCTTGATCAGATTATGCATAGCTTTGTTATCATGTGGCCATGGCTTCCTCTAACAATGTTGCTATTCTCTTCTCTATTATTCCTCCTTTCAAAAAAGATGAAGTTAAATAATGTGATTGTTCATCTTCCTCCAACCCCACCAAAGCTTCCTTTCTTAGAATACGGCCCCGTCATGCTCCTCCAACTTGGCTCTATCCCGACCGTCGTAGTCTCCTCCGCCGCCGCTGCAAAAGAGGTGTTAAAAGTTCACGACCTCGCTTCATGTAGCCGCCCTCGCTCGGTTGCTAATGCAAGATTTTCATACAACTATCTAGACATCGGGTTAGCTCCGTATGGCGAGCATTGGAGGGAAGTTCGAAAGATTTGTGTTCTTGAGCTCTTCAGCGCAAGACGAGTGCAATCGTTTCAAAAGATAAGAGAAGAAGAGATTGGTGTGATGTTAAATTCCATTTCTCAATCTTCATTATTATCTAATGATCCAATTGATTTGAGTGAGAAATTTTACTCACTCACTGCAAATATCATAACTCGGATTGCTTTTGGGAAGAAGTTTAGAGGGGGTGAGTTAGATAATGAGAATTTTCAAAAGGTTATTAGAAGAGCAATGGCAGCAGTGGGAAGCTCTTCAGCAGCTGATTATTTTCCTAAAGTGGGTTGGATTATTGATTGGGTTAATGGTGTTCATAGGAGATTGGAGATGAGTTTTAATGAGTTGGATATTTTTTTTCAACATATAGTGGATGATCGTATCAAGTTTAGGGAGAGTCCTCGTTCGTCTCAGGATAACGATGATGATGAACAAGAAAACATTGTTGATGTTCTGTTGAAAATGGAGAAGAATAGCTCTCAATTTGGTGAAATGAAACTCACTAGAGATTGCATCAAAGCACTCATCATGGATATATTTCTTGCTGGAGTGGAAACAGGAGCAACCACACTTGTATGGGCAATGACAGAGCTGATAAAAAATCCAAAGGTAATGAAAAAGCTACAAAATGAGATCAGAAATTGTGTAAAAGAAAGTACAATAGTAAAAGAGAGTGACCTTCAAAATCTTGAATATCTAAAAGCAGTGGTCAAGGAAGTGCTAAGGTTACATACACCAGCCCCACTTCTACTTCCAAGAGAAGCCATGTCTCATTTTAAGCTAAATGGTTATGATATTCTCCCAAAAACTCACATTCATGTCAACGTCTGGGCGATCGGACGAGACTCGGAAATATGGACAAACCCAGAAGAGTTCATACCAGAGAGATTTATAGGAAGTAATATTGATTACAAAGGACAGAACTTCGAGTTCTTGCCGTTCGGATCGGGTCGGAGAATTTGCCCTGGAATGAATATGGCAAGCTTTACAGTGGAGCTAGCGTTGGCTAATATGTTATTGTGTTTTGATTGGAAATTACCAAATGGAGTGAAAGAAGAAGATATAGATATGGAAGAGGAATTGGGTCTTACAGCTTCCAAGAAATCACCTCTTCAACTTGTTCCTGTCCATTACTTCAACTCCAAAGCATAG 1527 39.82 MFSLDQIMHSFVIMWPWLPLTMLLFSSLLFLLSKKMKLNNVIVHLPPTPPKLPFLEYGPVMLLQLGSIPTVVVSSAAAAKEVLKVHDLASCSRPRSVANARFSYNYLDIGLAPYGEHWREVRKICVLELFSARRVQSFQKIREEEIGVMLNSISQSSLLSNDPIDLSEKFYSLTANIITRIAFGKKFRGGELDNENFQKVIRRAMAAVGSSSAADYFPKVGWIIDWVNGVHRRLEMSFNELDIFFQHIVDDRIKFRESPRSSQDNDDDEQENIVDVLLKMEKNSSQFGEMKLTRDCIKALIMDIFLAGVETGATTLVWAMTELIKNPKVMKKLQNEIRNCVKESTIVKESDLQNLEYLKAVVKEVLRLHTPAPLLLPREAMSHFKLNGYDILPKTHIHVNVWAIGRDSEIWTNPEEFIPERFIGSNIDYKGQNFEFLPFGSGRRICPGMNMASFTVELALANMLLCFDWKLPNGVKEEDIDMEEELGLTASKKSPLQLVPVHYFNSKA 508
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3817059 3819055 - MELO3C011926.2.1 Cme10g00599 339485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g00599 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Cme10g00599 508 PANTHER CYTOCHROME P450 71B11-RELATED 16 503 - -
Cme10g00599 508 Pfam Cytochrome P450 56 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00599 508 Gene3D Cytochrome P450 41 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00599 508 PRINTS E-class P450 group I signature 173 191 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00599 508 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00599 508 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00599 508 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00599 508 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00599 508 PRINTS E-class P450 group I signature 54 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00599 508 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00599 508 PRINTS E-class P450 group I signature 78 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00599 508 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00599 508 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00599 508 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00599 508 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00599 508 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00599 508 SUPERFAMILY Cytochrome P450 46 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00599 508 PANTHER CYTOCHROME P450 71B16-RELATED 16 503 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme10g00591 Cme-Chr10:3791009 Cme10g00599 Cme-Chr10:3817059 2.22E-28 dispersed
Cme10g00592 Cme-Chr10:3793023 Cme10g00599 Cme-Chr10:3817059 8.66E-35 dispersed
Cme10g00594 Cme-Chr10:3794363 Cme10g00599 Cme-Chr10:3817059 1.23E-147 dispersed
Cme10g00595 Cme-Chr10:3799636 Cme10g00599 Cme-Chr10:3817059 0 dispersed
Cme10g00596 Cme-Chr10:3804018 Cme10g00599 Cme-Chr10:3817059 0 dispersed
Cme10g00597 Cme-Chr10:3808996 Cme10g00599 Cme-Chr10:3817059 1.63E-155 dispersed
Cme10g00599 Cme-Chr10:3817059 Cme12g01644 Cme-Chr12:23559875 1.45E-140 dispersed
Cme10g00598 Cme-Chr10:3814447 Cme10g00599 Cme-Chr10:3817059 3.84E-63 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g00599 - K01773 csv:101216707 845.499