Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g00654 ATGGCGAACGATCAGAAAGAAAAGAACATCCTCAAGAGCACCGCTCTTCTCCAGTATATTCTGAAAGCCAACTCCTATCCGAGAGAGCATGAACAGTTGAAGGAACTCAGGGTAGCGACGGTCGAGAAATTTAACAAGCCCAAGAGTATGATGAGTGTACCGGTGGATGAAGGATTGTTTCTATCAATGCTTTTGAAATTGATGAATGCAAAGAAAACGATAGAGATCGGCGTGTTCACTGGCTATTCGCTCCTCACAACGGCGCTTGCATTGCCCGCTGATGGCCAGATAACGGCAATTGATGTGGATAGACAAACGTTCGAATTTGGTTTGCCATTTATAAGAAAGGCGGGAGTTGATCGCAAGATCAAATTTGTGGAATCCCAGGCGTTGGTTGCCCTCCGTGACCTCATCAAGAATGGCAAAGAAGAGTTTGATTTTGCATTTGTTGATGCACTGAAATCAGAGTACATAGAATATCATGAGTTGCTTCTAAAATTGGTGAAGGTTGGTGGAGTAATCGCCTATGATAACACACTGTGGTTTGGATTAGTTGCGCTAAGCGACGACGAGGTCGATGAAGGTTTCAGGAAGAACAAAGTTCATGTGGAACGGTTTAATGCTTTTTTAGTAAATGACCGGCGGGTGGAAATAGCTCTCCTCTCCATTGGAGATGGTGTCACTCTCTGTAGGCGCATCAAATAA 705 44.26 MANDQKEKNILKSTALLQYILKANSYPREHEQLKELRVATVEKFNKPKSMMSVPVDEGLFLSMLLKLMNAKKTIEIGVFTGYSLLTTALALPADGQITAIDVDRQTFEFGLPFIRKAGVDRKIKFVESQALVALRDLIKNGKEEFDFAFVDALKSEYIEYHELLLKLVKVGGVIAYDNTLWFGLVALSDDEVDEGFRKNKVHVERFNAFLVNDRRVEIALLSIGDGVTLCRRIK 234
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4174499 4177888 + MELO3C011872.2.1 Cme10g00654 339540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g00654 234 PANTHER FLAVONOID 3',5'-METHYLTRANSFERASE-LIKE 6 233 - -
Cme10g00654 234 PANTHER O-METHYLTRANSFERASE-RELATED 6 233 - -
Cme10g00654 234 Gene3D Vaccinia Virus protein VP39 1 234 IPR029063 -
Cme10g00654 234 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 9 233 IPR002935 GO:0008171
Cme10g00654 234 CDD AdoMet_MTases 74 176 - -
Cme10g00654 234 Pfam O-methyltransferase 28 233 IPR002935 GO:0008171
Cme10g00654 234 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 45 232 IPR029063 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g00048 Cme-Chr1:394922 Cme10g00654 Cme-Chr10:4174499 1.05E-65 dispersed
Cme07g01413 Cme-Chr7:19820985 Cme10g00654 Cme-Chr10:4174499 2.09E-43 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g00654 K00588 K13272 csv:101212121 379.407