Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g00659 ATGCACTCCAATACCTTTTCTCCAATCCACATCTTCAAGGGGAAAAAGAAGATGAAGCTCCTTGTTCTAGCCATCCTCACCATCTCACTACTCTTCCCTTTCAGCCTCCTCAATTTCCTCTTCTGCTCTCTCCTTGCCTTCTCTCTCAACTACTGGCTCATCCCCGGTGGTTTTGCATGGCGTAATCACCACCGCTTCTCTGTCAACCTCCCTGGACCCTCTGGTTGGCCACTCCTTGGCACGCTCCCACAAATGGGGCCACTTGCTCACCGGAATCTTGCTGCCATTGCTCACTCCTTCAAAGCCACACGCCTCATGTCCTTTAGCATGGGCGCTACTCGAGCCATCATAAGTAGCCACCCTGACACGGCCAAGCAGATTCTTTGTGGGTCAGCTTTCTCCGACCGACCGGTCAAGCAATCGGCTAAGCTTATGATGTTCGAGAGAGCCATTGGCTTTGCTCCAAATGGGGTTTATTGGCGCAATCTTCGACGAATTGCTGCCAACCACATGTTTTCCCCACGGAAAATTTCCGACCTGGAGGGGCTCCGTAGGGAGGTGGCGGATGAAATGGTGGCAGAGGTGTCAGGAAATATGGCGAGTGAGGGGGTGGTGAGGCTGAGAGAGGTGCTGCAGAAGCATTCTTTGAAGAACATAATAGAGAGTGTGTTTGGGAGTGGTATGGAGATGGGGAGGAAGGGAGAGCTTAGTGATATGGTGAGAGAAGGGTATGAATTGATAGCGATGTTCAATTGGGAAGATTATTTTCCGATCAGCTTTTTGGATTTTAGTGGAGTGAAACGAAGGTGTAATGAATTGGCGGGCAGGGTTAATGTGGTAATTGGACAGATCGTTGAAGAGAGAAAAAGAGTAAATAACGAGTTTAATAATGATTTTCTTACTACTTTGCTAACTTTGCCAAAGGAGGATCAGTTGAGCGATTCAGATATGGTGGCTGTTTTATGGGAAATGATATTTCGTGGAACCGACACTATAGCAATACTCCTAGAATGGATAATGGCCAGAATGATACTACACCCAGATATCCAAGCCAAAGCTCAGGACGAGATTGACTTGTGCGTAGGGGGTAATAGGCACGTGCGTGATTCCGACATCCCGAACCTTCCCTACCTCCAAGCAATAGTGAAAGAGGTTCTTCGTCTACATCCTCCAGGGCCATTGTTGTCGTGGGCTCGATTGGCAGTCCACGATGTCCACGTGGACAAGATCTTAATCCCAGCTGGCACAACGGCAATGGTGAACATGTGGGCCATAGCCCACGACCCGTCGATATGGAAAGACCCATGGACATTTAAGCCAGAACGGTTCATTGAAAATGACATGTCGATCATGGGTTCGGACTTGAGGTTGGCACCTTTTGGAGCTGGGCGAAGGGCATGTCCAGGAAGGGCCTTGGGTTTAGCCACTGTGCATCTATGGCTAGCCAATTTTCTGCACCGGTTTAGATGGATTCCATGTTCATCCACTAAATCGGTTAATTTGTCAGAGTGTTTGAAACTATCACTTGAAATGAAGAAGCCTTTGAATTGTCGTGTGGTTAGTCGGTGA 1569 48.44 MHSNTFSPIHIFKGKKKMKLLVLAILTISLLFPFSLLNFLFCSLLAFSLNYWLIPGGFAWRNHHRFSVNLPGPSGWPLLGTLPQMGPLAHRNLAAIAHSFKATRLMSFSMGATRAIISSHPDTAKQILCGSAFSDRPVKQSAKLMMFERAIGFAPNGVYWRNLRRIAANHMFSPRKISDLEGLRREVADEMVAEVSGNMASEGVVRLREVLQKHSLKNIIESVFGSGMEMGRKGELSDMVREGYELIAMFNWEDYFPISFLDFSGVKRRCNELAGRVNVVIGQIVEERKRVNNEFNNDFLTTLLTLPKEDQLSDSDMVAVLWEMIFRGTDTIAILLEWIMARMILHPDIQAKAQDEIDLCVGGNRHVRDSDIPNLPYLQAIVKEVLRLHPPGPLLSWARLAVHDVHVDKILIPAGTTAMVNMWAIAHDPSIWKDPWTFKPERFIENDMSIMGSDLRLAPFGAGRRACPGRALGLATVHLWLANFLHRFRWIPCSSTKSVNLSECLKLSLEMKKPLNCRVVSR 522
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4202033 4207454 + MELO3C011869.2.1 Cme10g00659 339545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g00659 522 PANTHER CYTOCHROME P450 78A7-RELATED 19 522 - -
Cme10g00659 522 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00659 522 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00659 522 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00659 522 PRINTS P450 superfamily signature 467 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00659 522 SUPERFAMILY Cytochrome P450 71 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00659 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Cme10g00659 522 Gene3D Cytochrome P450 60 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00659 522 Pfam Cytochrome P450 71 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00659 522 PANTHER CYTOCHROME P450 FAMILY PROTEIN, EXPRESSED 19 522 - -
Cme10g00659 522 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00659 522 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00659 522 PRINTS E-class P450 group I signature 379 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00659 522 PRINTS E-class P450 group I signature 421 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00659 522 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00659 522 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme10g00659 Cme-Chr10:4202033 Cme12g01927 Cme-Chr12:25293372 0 dispersed
Cme10g00659 Cme-Chr10:4202033 Cme03g01458 Cme-Chr3:23861080 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g00659 - - csv:101212611 954.896