Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g00664 ATGTTGGGGGCAGCAGGAATTTTCATCCCGGAATTCTTGACAAAGATCGGTATATTGAACACTCCTTCGTGGTACTCCGCCGGTGAATTGGAATATTTCACCGACACCACCACTCTATTCATAGTGGAACTCATTTTCATCGGTTGGGCCGAGGGTAGACGGTGGGCCGACATCCTCAAACCCGGCTGCGTCAACACCGACCCGATTTTCCCTAACAACAAACTGACCGGAACCGACGTCGGGTACCCTGGTGGGCTCTGGTTTGACCCACTCGGATGGGGCAGCGGATCACCGGAAAAGATTAAGGAATTGAGAACGAAAGAGATTAAGAACGGACGATTGGCTATGTTGGCGGTGATGGGAGCTTGGTTCCAACACATTTACACGGGCACCGGTCCCATTGATAACCTTTTCGCTCACCTTGCCGATCCCGGCCACGCCACCGTCTTCGCCGCATTCACACCAAAGTGA 471 52.87 MLGAAGIFIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK 156
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4242300 4243846 + MELO3C011865.2.1 Cme10g00664 339550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g00664 156 Gene3D Chlorophyll a/b binding protein domain 1 146 - -
Cme10g00664 156 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 156 IPR001344 GO:0009765|GO:0016020
Cme10g00664 156 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 156 - -
Cme10g00664 156 SUPERFAMILY Chlorophyll a-b binding protein 1 154 - -
Cme10g00664 156 Pfam Chlorophyll A-B binding protein 1 126 IPR022796 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g00318 Cme-Chr2:2605614 Cme10g00664 Cme-Chr10:4242300 4.68E-66 dispersed
Cme10g00664 Cme-Chr10:4242300 Cme02g00798 Cme-Chr2:10216670 9.14E-32 dispersed
Cme10g00664 Cme-Chr10:4242300 Cme02g01877 Cme-Chr2:25348203 5.44E-51 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g00664 K08908 - csv:101214055 331.643