Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g00674 ATGCCAATCTCACCCTCAAGAACTCTACAAGTTTCTCATTCACAAAGCATGATACAACCTTTCTCAACTCTTCTTTTAAGTAGAGGGAAGTTGATCCATGTCGAAGCCGAAAACTACTACTCCGCCATGACTACTCGCAACCAAGATTCGGTACAAGACGAGAAACACATTTTCCGCAGCCAACTTCCTGAGGTCCAAGTGCCTTGTGATATCACACTGCCTGAGTTTGTACTACAGAATGCTGAATCATATGCCGAAAATGTGGCATTCGTGGAAGCCATGAGCGGAAAGGCATACACTTACCGTGAAGTCTTAAGAGACACAAATAGATTTTCCAAGGCCTTGCACTCTCTGAGGTTGAAGAAAGGGCATGTGGTTCTTGTTGTTCTACCTAATGTTGCAGAATACGCGATTGTTGCTTTAGGGATAATGACTGCTGGAGGTGTTTTTTCGGGAGTGAATCCGGCAGCTCACATATCAGAAATCAAAAAGCAAGTGGAGGTAGCAGAAGCCAAACTTGTTGTCACAAATGCCGCAAACTTCGAAAAGGTGAGGGAATTAAAGCTACCAGTCATCTTATTAGAGGAAGAACTAATGGAAGGTGCCATGAATTGGCACAAACTTCTTGAAGCAGCAGATCGTGCAGGCAACAATTTTGTTAAAGAAGAGATTAAGCAAACTGATCTATGTGCCCTTCCTTTCTCATCAGGAACCACAGGAGTTTCCAAAGGTGTTATGTTAACTCACCGAAATCTCGTAGCTAATATGTGTTCGACTCTCTCCGGTGTCCCGCAAGAAATGGAGGGCAAGGTCACGACACTAGGCCTTATTCCGTTCTTCCATATTTATGGGATCACTGGCATATGTTGTTCTACACTTAGAAACAAGGGAAAAGTTGTGGTGATGGGAAGATTTGATCTCAGGACTTTCATTAATGCTCTCATAACACATGAGATCACATTTGCTCCAATTGTTCCTCCTATTATCCTGGCTTTGGTTAAGAATCCCATTGTGGAAGAATTTGATCTTAGCAGTCTCAAACTTCAGGCTATTATGACTGCAGCTGCTCCACTCGCACCTGAACTTCAAACTGCCTTCGAGAGAAAGTTCCCTGGCGTGGACGTTCAAGAGGCATATGGACTTACTGAGCACTGCTGCATCACTCTTAACTATGGAAATATAGGGAAAGAGAATCTCAGTGCAAAGAAAAACACAGTTGGCCGTATTCTTCCTAATCTAGAAGTCAAATTCATAGACCCGGACACTGGAAGGTCTCTGCCGAAGAACACGCCGGGTGAAATCTGTGTAAGAAGCCAATGTGTGATGCAAGGCTACTACAAAAACGAAGAGGAGACTTCAAGGACGATCGATAGCAAAGGCTGGATGCATACTGGGGATATTGGATACATCGATGACGATGGCGACGTGTTTATTGTGGATCGTATCAAGGAATTGATCAAGTACAAAGGCTTTCAAGTTGCTCCAGCTGAGTTAGAGGCAATCCTTCTAACTCATCCCTCCATTGAAGATGCAGCTGTGGTGCCGCTGCCAGATGAAGAAGCTGGTGAGATCCCAGCAGCAAGCGTTGTGATGGCTCCGAACTCAAACGAAACCGAAGAAGAAATAATCAAACACGTTGCCTCAAATGTTGCACATTATAAGAAAGTTAGACTCGTTCATTTTGTAGACACCATCCCGAAGTCGCCTTCTGGGAAAGTTATGAGAAGGTTGATCAAAGAGAAGATGATCGAAAAGATTCGAGCTGATGAATCCGCTAGAATTGTCTTCTAA 1791 43.83 MPISPSRTLQVSHSQSMIQPFSTLLLSRGKLIHVEAENYYSAMTTRNQDSVQDEKHIFRSQLPEVQVPCDITLPEFVLQNAESYAENVAFVEAMSGKAYTYREVLRDTNRFSKALHSLRLKKGHVVLVVLPNVAEYAIVALGIMTAGGVFSGVNPAAHISEIKKQVEVAEAKLVVTNAANFEKVRELKLPVILLEEELMEGAMNWHKLLEAADRAGNNFVKEEIKQTDLCALPFSSGTTGVSKGVMLTHRNLVANMCSTLSGVPQEMEGKVTTLGLIPFFHIYGITGICCSTLRNKGKVVVMGRFDLRTFINALITHEITFAPIVPPIILALVKNPIVEEFDLSSLKLQAIMTAAAPLAPELQTAFERKFPGVDVQEAYGLTEHCCITLNYGNIGKENLSAKKNTVGRILPNLEVKFIDPDTGRSLPKNTPGEICVRSQCVMQGYYKNEEETSRTIDSKGWMHTGDIGYIDDDGDVFIVDRIKELIKYKGFQVAPAELEAILLTHPSIEDAAVVPLPDEEAGEIPAASVVMAPNSNETEEEIIKHVASNVAHYKKVRLVHFVDTIPKSPSGKVMRRLIKEKMIEKIRADESARIVF 596
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4281476 4284298 - MELO3C011858.2.1 Cme10g00674 339560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g00674 596 Gene3D - 55 483 IPR042099 -
Cme10g00674 596 Pfam AMP-binding enzyme 79 488 IPR000873 -
Cme10g00674 596 CDD 4CL 67 576 - -
Cme10g00674 596 Gene3D - 484 586 IPR045851 -
Cme10g00674 596 Pfam AMP-binding enzyme C-terminal domain 497 572 IPR025110 -
Cme10g00674 596 SUPERFAMILY Acetyl-CoA synthetase-like 50 585 - -
Cme10g00674 596 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 49 585 - -
Cme10g00674 596 ProSitePatterns Putative AMP-binding domain signature. 232 243 IPR020845 -
Cme10g00674 596 PANTHER 4-COUMARATE--COA LIGASE-LIKE 1 49 585 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme10g00674 Cme-Chr10:4281476 Cme12g00392 Cme-Chr12:5642969 1.71E-131 dispersed
Cme10g00674 Cme-Chr10:4281476 Cme02g01554 Cme-Chr2:22576638 3.09E-138 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g00674 K01904 - csv:101220731 1112.44