Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g00733 CTAAGGAAAAAAAAATTCACACAAAGCATTTCATCTCTCTCCTCTTTCTCTCTCTCTCTCTACTTTTTCCTAGAAAATCACTTCAAATTTCTCTTCATATATTTTCCCAAGAGAATGGGAAAGCTTATTAGCTTTTTCAACTGCTGCAATGGCTTTCTTGAGAATTCAAAACCCTATTTTGCTATGATATCTTTACAATTTGGATATGCTGGCATGAACATCATTTCTAAAGTCTCTCTTAGCAGAGGGATGAGCCATTACGTCCTCGTCGTTTATCGACATGCTTTTGCTACCGCTTCTATTGCCCCCTTTGTTCTCTTCTTCGAACGGAGAGGACAGCCAAGGATGACATTCAAAGTTTTCATACAAATATTTGTGTTGGCTTTGCTTGGCCCTGTGATTGATCAAAATTTCTACTACGCTGGACTAAAATATACTTCACCAACTTTCTCTTGTGCCATGAGCAACATGCTGCCTGCAATGACATTTGTGATGGCTGTGATCTTTAGGATGGAAAAATTGGAAATGAAGAAATTGAGATGCCAAGCAAAAGTATTGGGAACATTAGTGACAGTGGGTGGAGCAATGCTAATGACTTTATACAAAGGTCCACCTCTTCAAATGCCTTGGTCTAAGAATTCTCATCTCACAAATTCTAGTGAATCCTCCAACAACAAAGATTGGTTCAAAGGCTCCATTTTCCTCATCATTGCCACTCTTGCTTGGGCTTCTCTCTTTGTCTTGCAGAATCAGGTGTTGAAGACATACAAAAACCATCAATTTACTCTCACTACTCTTGTGTGTTTTATGGGAACTTTACAAGCTATAGCTGTGACTTTAGTAGCTGAACACAAAGCTTCTGTTTGGAGAATTGGTTGGGATATGAATCTTCTTGCTGCTGCCTATGCTGGAATTGTGACATCAAGTATATCATACTATGTACAAGGATTGGTGATGAAAAAGAGAGGACCTGTGTTTGCAACTGCATTTAGCCCTTTGATGATGATAATTGTTGCCATCATGGGCTCTTTCATCCTTGCTGAAAAGATTTTTCTTGGAGGAATAATAGGATCCATCTTGATAGTGTTTGGGCTGTATTCAGTACTTTGGGGAAAGCACAAAGAGAATTTGGAGAGCAAAAGTGGTTCTGATCATGATAATGAAATACCAGAAGTAATCAAGGCTTCTAATAATTCTCAACCAAATATTAGTAATAATAACTCAATTTTTATTTCCATGCCTACCCCTGAAACCCCCACCAAACCCAACCAAATCCCATGA 1281 38.56 LRKKKFTQSISSLSSFSLSLYFFLENHFKFLFIYFPKRMGKLISFFNCCNGFLENSKPYFAMISLQFGYAGMNIISKVSLSRGMSHYVLVVYRHAFATASIAPFVLFFERRGQPRMTFKVFIQIFVLALLGPVIDQNFYYAGLKYTSPTFSCAMSNMLPAMTFVMAVIFRMEKLEMKKLRCQAKVLGTLVTVGGAMLMTLYKGPPLQMPWSKNSHLTNSSESSNNKDWFKGSIFLIIATLAWASLFVLQNQVLKTYKNHQFTLTTLVCFMGTLQAIAVTLVAEHKASVWRIGWDMNLLAAAYAGIVTSSISYYVQGLVMKKRGPVFATAFSPLMMIIVAIMGSFILAEKIFLGGIIGSILIVFGLYSVLWGKHKENLESKSGSDHDNEIPEVIKASNNSQPNISNNNSIFISMPTPETPTKPNQIP 426
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4653085 4656822 + MELO3C011801.2.1 Cme10g00733 339619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g00733 426 PANTHER WAT1-RELATED PROTEIN 52 404 - -
Cme10g00733 426 MobiDBLite consensus disorder prediction 394 426 - -
Cme10g00733 426 MobiDBLite consensus disorder prediction 394 418 - -
Cme10g00733 426 Pfam EamA-like transporter family 58 198 IPR000620 GO:0016020|GO:0016021
Cme10g00733 426 Pfam EamA-like transporter family 230 369 IPR000620 GO:0016020|GO:0016021
Cme10g00733 426 PANTHER WAT1-RELATED PROTEIN 52 404 IPR030184 GO:0016021|GO:0022857
Cme10g00733 426 SUPERFAMILY Multidrug resistance efflux transporter EmrE 92 202 - -
Cme10g00733 426 SUPERFAMILY Multidrug resistance efflux transporter EmrE 289 374 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g00502 Cme-Chr4:4070978 Cme10g00733 Cme-Chr10:4653085 2.09E-84 dispersed
Cme04g02124 Cme-Chr4:28565022 Cme10g00733 Cme-Chr10:4653085 4.42E-149 dispersed
Cme04g02125 Cme-Chr4:28571020 Cme10g00733 Cme-Chr10:4653085 7.96E-170 dispersed
Cme05g01459 Cme-Chr5:24036188 Cme10g00733 Cme-Chr10:4653085 4.63E-71 dispersed
Cme07g00859 Cme-Chr7:8550197 Cme10g00733 Cme-Chr10:4653085 4.43E-122 dispersed
Cme08g01439 Cme-Chr8:12876104 Cme10g00733 Cme-Chr10:4653085 1.20E-156 dispersed
Cme10g00503 Cme-Chr10:3223958 Cme10g00733 Cme-Chr10:4653085 1.41E-40 dispersed
Cme10g00733 Cme-Chr10:4653085 Cme10g00877 Cme-Chr10:6138411 6.53E-107 dispersed
Cme12g00762 Cme-Chr12:13844412 Cme10g00733 Cme-Chr10:4653085 1.86E-86 dispersed
Cme10g00733 Cme-Chr10:4653085 Cme08g02377 Cme-Chr8:30644568 2.70E-108 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g00733 - - csv:101206648 689.493