Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g00784 ATGCTTGCTGCTGTTCTATGGCTGGGAAATGTTTCCTTTAGTGTTATAGACAATGAGAATCATGTGGAGCCTGTGGAAGATGAAGGTTTACAGACTGTTGCTAAGCTGATTGAGTGTGAGATTGAGGAGCTTAAACTAGCTTTATCAACTCGAAAAATGAGAGTTGGGAATGACAGCATTGTCCAAAAGCTTACCTTATCTCAGGCAATTGACACAAGAGATGCTTTGGCAAAGTCAATTTACGCTTGTTTGTTTGAGTGGTTGGTCGAACAAATTAACAAATCTCTTGCTGTAGGCAAACGACGCACTGGCAGATCCATAAGCATTCTTGATATCTATGGCTTTGAATCATTTGATAGGAATAGTTTTGAACAGTTCTGTATTAACTATGCAAATGAGAGACTACAGCAGCATTTCAATCGTCATTTATTTAAGCTAGAGCAGGAGGAATACATTCAAGATGGCATCGATTGGGCAAAAGTTGATTTTGACGACAATCAAGATTGTCTCAGTCTGTTTGAAAAGAAACCTTTGGGATTGTTGTCCCTGTTAGACGAGGAGTCTACTTTTCCAAATGGCACAGATCTGACCTTCGCGAACAAGCTTAAGCAGCATTTGGGTCCTAATTCATCTTTTAGAGGAGAACGAGGGAAAGCCTTCACTGTCGGTCATTATGCAGGAGAGGTCACTTATGACACAACTGGTTTTCTGGAGAAAAACAGGGACTTGCTACATTTAGATTCTATTCAACTCCTATCCTCATGCTCATGCCATCTCCCTCAGATTTTTGCATCCAACATGCTAACTCAGTCGGAAAAGTCCATAGGTGGCACTTTACACAAGTCTGGTGGTGCAGAATCCCAAAAATTAAGTGTTGCAAGGAAGTTTAAGGGTCAATTATTCCAATTGATGCTCCGTCTTGAAAATACAACACCCCATTTCATCCGTTGTATCAAGCCCAACAACGTTCAATCTCCTAGATTGTATGAGCAAGGACTTGTATTACAACAGTTAAGATGTTGTGGGGTCCTAGAAGTGGTACGAATATCACGAGCTGGTTTTCCTACCCGGATGTCACATCAGAAATTTGCTAGAAGGTATGGTTTCCTTCTACAAGAAAGCATTGCATCACAGGATCCCCTTAGTGTCTCAGTCGCAATTCTTCATCAATTCAATATATTGCCTGAAATGTACCAAGTTGGCTATACAAAATTGTTTTTCCGAACTGGGCAGATTGGAGTGCTTGAAGATACGAGGAACCGCACGCTCCATGGGATTCTCTCTGTTCAAAGCTGTTACAGAGGGCACCTGGCTCGACGCCACCTTAAAGAGCTAAAGAGGGGGATTTCCGTGCTTCAGTCATTTGCGCGTGGGCAGAAAGCAAGAAAAGAATATGCAATCTTGATACAAAGGCATAGGGCTGCTATTTCTATTCAAAAGTGTGTGAAAGCCAGAATTGCTAGTAAACATTTGAAGAATGTCTGTGATGCATCGCTTACGATACAATCAGTTATCCGTGGCTGGTTGGTGAGGAGATGCTCAGGAGATATTGGATTAATGAAACCTGGTGGCCTGACGGCAAATGGGTCAGGTGAAGTGCTTGTTAAGTCATCATTCCTTTCAGAGTTGCAACGCCGTGTCCTGAAAGCAGAGGCTGCTTTGAGAGAGAAAGAAGAGGAAAATGACATCCTCCATCAGCGCCTCCAACAGTATGAGAACCGTTGGTCAGAGTATGAGCTGAAAATGAAGTCAATGGAAGAGGTATGGCAGAGACAAATGAGATCCCTGCAATCTAGCCTCTCCATTGCAAAGAAAAGCTTAGCAGTTGATGATTCAGAGAGAAATTCTGATGCATCAGTAAATGCAAGTGATGACAGAGGATACAGTTGGGAAGTGGGTAGCAACAACACAGCTAATGAAAGCAATGGAGTAAGACCAATGAATGCAGGTCTCAGCGTCATTAGCCGGTTGGCTGAAGAATTCGAACAAAGAAGTCAAGTCTTTGGTGATGATGCAAAGTTCTTGGTAGAGGTAAAATCCGGTCAAGTTGAGGCAAGTCTTGACCCAGATAGAGAACTAAGAAGGTTGAAACAAATGTTTGAAGCATGGAAGAAAGATTACGGGGGAAGGCTGCGTGAAACGAAAGTGATTTTGAATAAGCTTGGGAATGAAGGTGCCATGGATAGAGTGAAAAAGAAATGGTGGGGAAGGAGGAACAGCACAAGGTATAGTTAA 2235 42.46 MLAAVLWLGNVSFSVIDNENHVEPVEDEGLQTVAKLIECEIEELKLALSTRKMRVGNDSIVQKLTLSQAIDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFDDNQDCLSLFEKKPLGLLSLLDEESTFPNGTDLTFANKLKQHLGPNSSFRGERGKAFTVGHYAGEVTYDTTGFLEKNRDLLHLDSIQLLSSCSCHLPQIFASNMLTQSEKSIGGTLHKSGGAESQKLSVARKFKGQLFQLMLRLENTTPHFIRCIKPNNVQSPRLYEQGLVLQQLRCCGVLEVVRISRAGFPTRMSHQKFARRYGFLLQESIASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRTGQIGVLEDTRNRTLHGILSVQSCYRGHLARRHLKELKRGISVLQSFARGQKARKEYAILIQRHRAAISIQKCVKARIASKHLKNVCDASLTIQSVIRGWLVRRCSGDIGLMKPGGLTANGSGEVLVKSSFLSELQRRVLKAEAALREKEEENDILHQRLQQYENRWSEYELKMKSMEEVWQRQMRSLQSSLSIAKKSLAVDDSERNSDASVNASDDRGYSWEVGSNNTANESNGVRPMNAGLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGQVEASLDPDRELRRLKQMFEAWKKDYGGRLRETKVILNKLGNEGAMDRVKKKWWGRRNSTRYS 744
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5073611 5088478 - MELO3C011755.2.1 Cme10g00784 339670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g00784 744 ProSiteProfiles Myosin motor domain profile. 1 420 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cme10g00784 744 Gene3D Myosin VI head, motor domain, U50 subdomain 1 288 - -
Cme10g00784 744 MobiDBLite consensus disorder prediction 611 644 - -
Cme10g00784 744 Gene3D - 353 421 - -
Cme10g00784 744 Gene3D - 116 310 - -
Cme10g00784 744 SMART MYSc_2a 1 421 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cme10g00784 744 MobiDBLite consensus disorder prediction 628 644 - -
Cme10g00784 744 Gene3D - 473 514 - -
Cme10g00784 744 Gene3D - 426 472 - -
Cme10g00784 744 ProSiteProfiles IQ motif profile. 424 450 IPR000048 GO:0005515
Cme10g00784 744 Pfam IQ calmodulin-binding motif 447 465 IPR000048 GO:0005515
Cme10g00784 744 Pfam IQ calmodulin-binding motif 497 512 IPR000048 GO:0005515
Cme10g00784 744 Pfam IQ calmodulin-binding motif 427 443 IPR000048 GO:0005515
Cme10g00784 744 PRINTS Myosin heavy chain signature 106 134 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cme10g00784 744 PRINTS Myosin heavy chain signature 159 187 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cme10g00784 744 Gene3D Kinesin motor domain 101 349 IPR036961 -
Cme10g00784 744 ProSiteProfiles IQ motif profile. 445 474 IPR000048 GO:0005515
Cme10g00784 744 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 468 IPR027417 -
Cme10g00784 744 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 742 - -
Cme10g00784 744 Pfam Myosin head (motor domain) 2 408 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cme10g00784 744 Coils Coil 540 588 - -
Cme10g00784 744 SMART iq_5 493 515 IPR000048 GO:0005515
Cme10g00784 744 SMART iq_5 470 492 IPR000048 GO:0005515
Cme10g00784 744 SMART iq_5 421 443 IPR000048 GO:0005515
Cme10g00784 744 SMART iq_5 444 466 IPR000048 GO:0005515
Cme10g00784 744 PANTHER MYOSIN 1 742 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g00738 Cme-Chr4:8550201 Cme10g00784 Cme-Chr10:5073611 0 dispersed
Cme10g00784 Cme-Chr10:5073611 Cme11g02415 Cme-Chr11:30969291 7.90E-106 dispersed
Cme10g00784 Cme-Chr10:5073611 Cme06g00435 Cme-Chr6:2750439 5.80E-108 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g00784 - K10357 csv:101222101 1426.77