Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme10g00786 | CTTCCTCTTCCTCTTCCTCTTCCTCTTCCTTCTCTCTCTCTCTCTCTCTCTCCCTCTCTCTCCTCTCAGCTTCAGCAATGGCAGCCACTACTACCTCCTCCTTCTAACCCTTCTTCAATCTCACTCCTAATTACTCGACCCCCCCTCCCCTCCCCTCCCCTCCCATCTTCCTTCTTCATGTCTAATTCTGATCATACTAATGGCGTCTCCAATGCCGCCGCCATCGACTCTCACAAGAATCAGTCCTCTTCCAATGGAGCCCTCGCTGTTAAAAAGCCTCCTTCTAAGGATCGTCATAGTAAGGTTGATGGTCGTGGCCGTCGTATCCGTATGCCCATCATCTGCGCTGCTCGTGTCTTCCAGCTGACTCGTGAACTTGGTCATAAGTCCGACGGTCAAACCATCGAGTGGCTTCTTCGTCAAGCCGAGCCTTCTATTATTGCTGCTACTGGTACTGGTACTACTCCTGCTAATTTCTCCTCTGTTTCTCTTTCCGTTAGAGGAAATGGCGGCGGCTCTGCTTCTCTCTCTTCCCCTTCTTCCACTACTTCTACTCTTTCCCTCTCACGTCCTCAAGCTCTTTCCGGTCCCACGCCGTTTATTCTTGGCAAGCGTGTTAGGTCCGACGATGATGCTAAAGACGATGGGTTAGGAGTGGGTCAAGCGGTTGGGTCCATAGTGGGTCCGACCGGGCCAGGTGGGTATTGGGCGATTCCGGCTAGACCCGATTATGGGCAGGTTTGGAGTTTTGCTGCCGCGGCTCCGTCGGAGATGGTGGTTCAACAGGGGGGGATTTCTCAACAAGCGTCGTTGTTTGCTCAACAGCAGCAGCCGATTAGAGAGGCGTCCGCGGCCAGAGTGGGGAATTACCTTCCTGGTCATCTGAATTTACTGGCGTCTTTGTCCGGTGGAGGTGGTTCTGGACGGCGGGAAGATGACCCTCGCTAA | 948 | 53.48 | LPLPLPLPLPSLSLSLSPSLSSQLQQWQPLLPPPSNPSSISLLITRPPLPSPPLPSSFFMSNSDHTNGVSNAAAIDSHKNQSSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGGSASLSSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDAKDDGLGVGQAVGSIVGPTGPGGYWAIPARPDYGQVWSFAAAAPSEMVVQQGGISQQASLFAQQQQPIREASAARVGNYLPGHLNLLASLSGGGGSGRREDDPR | 315 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 5105118 | 5106803 | - | MELO3C011754.2.1 | Cme10g00786 | 339672 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme10g00786 | 315 | MobiDBLite | consensus disorder prediction | 77 | 106 | - | - | |
Cme10g00786 | 315 | ProSiteProfiles | TCP domain profile. | 95 | 149 | IPR017887 | - | |
Cme10g00786 | 315 | Pfam | TCP family transcription factor | 95 | 180 | IPR017887 | - | |
Cme10g00786 | 315 | MobiDBLite | consensus disorder prediction | 168 | 194 | - | - | |
Cme10g00786 | 315 | PANTHER | TRANSCRIPTION FACTOR TCP4-RELATED | 60 | 312 | IPR005333 | GO:0003700 | |
Cme10g00786 | 315 | MobiDBLite | consensus disorder prediction | 92 | 106 | - | - | |
Cme10g00786 | 315 | PANTHER | TRANSCRIPTION FACTOR TCP FAMILY-RELATED | 60 | 312 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme06g02231 | Cme-Chr6:29167155 | Cme10g00786 | Cme-Chr10:5105118 | 1.89E-94 | dispersed | |
Cme10g00701 | Cme-Chr10:4410767 | Cme10g00786 | Cme-Chr10:5105118 | 9.31E-38 | dispersed | |
Cme10g00786 | Cme-Chr10:5105118 | Cme12g02008 | Cme-Chr12:25710988 | 2.63E-37 | dispersed | |
Cme10g00786 | Cme-Chr10:5105118 | Cme10g00425 | Cme-Chr10:2683489 | 9.63E-39 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
42081 | PF03634 | TCP | 2.40E-32 | No_clan | Cme | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme10g00786 | K16221 | - | csv:101206050 | 419.468 |