Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g00831 ATGGCAACTTTGACACTGGGCAGCACCATCGGCTTCTCCCACTCTTCGTCTTCCTCAGATATCTCTGCTTACTGTATTCCCTCTTCAACCACCAGATTCTGCTTCTCCAGCATCATTCTTTCTCCTCTCAAACTTCAAAAACGAACATCTAGAAGAAGAGCTAGAGCTCTAATTACAGTGAAAATGGCTGCTCAAGCTTTTCAGGAAGTTCTTCCTCCAGCCCTCACTTCAGTTTCAGAACCACCTCCTATCTTCGATGGAACAACGAGGCTTTACATATCTTATACATGCCCTTATGCACAGCGTGTGTGGATTACTCGGAACTGTAAGGGTTTGCAGAATAAGATACAATTGGTTCCCATAAATCTACAAGATAGGCCTTCATGGTACAAGGAAAAAGTTTACCCACCTAATAAGGTTCCAGCTCTTGAACATAATAATGAAGTCAAAGGAGAGAGTCTTGACTTAATTAAATATATTGACAGCAATTTTGAAGGCCCTTCATTATTTCCTGATGAGCCAGGAAAGAGAGAGTTTGCTGAAGAGTTGATAAACTACGTGAATTCTTTCACTGGATCTGTGGTTTCTTCATTTAAAGGAGATGGAAACGAAGCTGATGTGGCATTTGACTACATCGAATCTGCTCTTTCAAAATATGGAGATGGTCCATTTTTCCTAGGCCAGTTTAGTCTGGTGGATATAGCTTATGCTCCGTTTATTGAAAGGTTTCGGCCGTTCTTATTGGAAGTAAAAACGTATGACATCACTGCTGGCAGGCCAAAACTGGCTGCTTGGATTGAGGAGATGAACAAGATCAAAGGGTACCAACAAACAAGGCGCGATCCACAGGAACATGTTGATAGTTATAAGAAGCGATTCTTGAGCCGTTTGTGA 894 41.83 MATLTLGSTIGFSHSSSSSDISAYCIPSSTTRFCFSSIILSPLKLQKRTSRRRARALITVKMAAQAFQEVLPPALTSVSEPPPIFDGTTRLYISYTCPYAQRVWITRNCKGLQNKIQLVPINLQDRPSWYKEKVYPPNKVPALEHNNEVKGESLDLIKYIDSNFEGPSLFPDEPGKREFAEELINYVNSFTGSVVSSFKGDGNEADVAFDYIESALSKYGDGPFFLGQFSLVDIAYAPFIERFRPFLLEVKTYDITAGRPKLAAWIEEMNKIKGYQQTRRDPQEHVDSYKKRFLSRL 297
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5513245 5519866 - MELO3C011714.2.1 Cme10g00831 339717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g00831 297 Gene3D - 166 297 - -
Cme10g00831 297 CDD GST_C_Lambda 173 290 - -
Cme10g00831 297 PANTHER GLUTATHIONE S-TRANSFERASE L2, CHLOROPLASTIC 42 294 - -
Cme10g00831 297 Pfam Glutathione S-transferase, C-terminal domain 208 267 - -
Cme10g00831 297 SUPERFAMILY GST C-terminal domain-like 164 293 IPR036282 -
Cme10g00831 297 Gene3D Glutaredoxin 62 165 - -
Cme10g00831 297 PANTHER GLUTATHIONE S-TRANSFERASE L1 42 294 IPR044629 GO:0004364
Cme10g00831 297 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 87 168 IPR004045 -
Cme10g00831 297 Pfam Glutathione S-transferase, N-terminal domain 91 167 IPR004045 -
Cme10g00831 297 SUPERFAMILY Thioredoxin-like 81 169 IPR036249 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g02575 Cme-Chr4:31828183 Cme10g00831 Cme-Chr10:5513245 1.96E-111 dispersed
Cme04g02576 Cme-Chr4:31833175 Cme10g00831 Cme-Chr10:5513245 4.95E-111 dispersed
Cme10g00831 Cme-Chr10:5513245 Cme06g00429 Cme-Chr6:2722784 8.64E-08 dispersed
Cme06g01581 Cme-Chr6:15937634 Cme10g00831 Cme-Chr10:5513245 1.48E-07 transposed
Cme10g00831 Cme-Chr10:5513245 Cme04g02573 Cme-Chr4:31818562 8.64E-91 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g00831 K00799 - csv:101220995 551.206