Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g00833 ATGGTATCTGAAACTTTTATGAAGATTGTATCACCTTGCTGGAAACCCTTAGTCGAAGGCGAAAATTCCAGCAGAGGTGGGGACGCAAGTGGTCGGGTTGACGGGCTGTTGTGGTACAAGGATTCTGGCCGCCATATTAATGGGGAATTCTCAATGGCAGTTATTCAGGCAAATAATTTGTTGGAAGATCGTAGCCAACTTGAGTCAGGGCCTCTGAGCTCGTATGAAACGGGTCCCGTTGGAACGTTCGTTGGAATTTATGATGGCCACGGAGGACCAGAAGCTGCACAATTCATAAATGATCGCCTTTTCAATAATATGAAGAAATTTATTCCAGAAAATCGGGGAGTATCTGCTGAAATTATTAACAAAGCGTTCTTGGAGACGGAGGAGGAATTTTTGTCTCTTGTAAAGAAACAATGGCTTATTAAGCCTCAAATTGCTTCGGTTGGTTCGTGCTGTTTGGTAGGCATAATATGTTGTGGATTACTATATATTGCAAATGCTGGTGATTCTAGAGTGGTGTTGGGAAGATTTGAAAGAACTCATAAAGAGGTTAAAGCCATCCAATTGTCATCTGAGCACAATGCTAGTATTGAATCTGTGAGAGAGGAGTTGCACTCGTTGCATCCCAATGATCCGCAGATCGTGGTGCTAAAGCACAAGGTGTGGCGTGTGAAGGGTGTTATACAGGTCTCAAGATCCCTTGGTGATGCTTATCTGAAGAAAACAGAGTTCAACCGAGAGCCTCTTTTGCCAAAGTTCAGATTACCAGAACCATTCCACAAGCCAATACTTAAAGCGGAGCCTGCTATTGTCGTGCAGAAACTGTATCCAGAGGATCAGTTTCTTATATTTGCTTCAGATGGTCTTTGGGAGTATATAAGCAATCAGGAAGCTGTCGACATCGTCCATAGTTGTCCACGTAATGGGGTTGCAAGGAAACTTGTTAAAGCCGCTCTTCATGGAGCTGCCAAAAAAAGAGAGATGAGATACACAGATTTGAAGAAGATTGATCGTGGGGTAAGAAGGCATTTTCACGACGATATCACTGTAATAGTTTTATTCCTCGATTCGCATCTGATTAGTCGCAGTCCAAGCTACGGACCAATGCTTTCAATCAGAGGAGGTTCTGGTATCCTCGCTAGATCATAG 1155 43.29 MVSETFMKIVSPCWKPLVEGENSSRGGDASGRVDGLLWYKDSGRHINGEFSMAVIQANNLLEDRSQLESGPLSSYETGPVGTFVGIYDGHGGPEAAQFINDRLFNNMKKFIPENRGVSAEIINKAFLETEEEFLSLVKKQWLIKPQIASVGSCCLVGIICCGLLYIANAGDSRVVLGRFERTHKEVKAIQLSSEHNASIESVREELHSLHPNDPQIVVLKHKVWRVKGVIQVSRSLGDAYLKKTEFNREPLLPKFRLPEPFHKPILKAEPAIVVQKLYPEDQFLIFASDGLWEYISNQEAVDIVHSCPRNGVARKLVKAALHGAAKKREMRYTDLKKIDRGVRRHFHDDITVIVLFLDSHLISRSPSYGPMLSIRGGSGILARS 384
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5527150 5532216 - MELO3C011713.2.1 Cme10g00833 339719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g00833 384 Pfam Protein phosphatase 2C 82 324 IPR001932 -
Cme10g00833 384 Gene3D - 39 365 IPR036457 -
Cme10g00833 384 PANTHER PROTEIN PHOSPHATASE 2C 38-RELATED 8 379 - -
Cme10g00833 384 SMART PP2C_4 41 355 IPR001932 -
Cme10g00833 384 SUPERFAMILY PP2C-like 60 358 IPR036457 -
Cme10g00833 384 CDD PP2Cc 50 357 IPR001932 -
Cme10g00833 384 ProSitePatterns PPM-type phosphatase domain signature. 83 91 IPR000222 GO:0043169
Cme10g00833 384 ProSiteProfiles PPM-type phosphatase domain profile. 49 357 IPR001932 -
Cme10g00833 384 PANTHER ALPHABET, ISOFORM E-RELATED 8 379 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme10g00833 Cme-Chr10:5527150 Cme11g00367 Cme-Chr11:3727600 0 dispersed
Cme10g00833 Cme-Chr10:5527150 Cme04g02578 Cme-Chr4:31839963 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g00833 K01102 - csv:101220760 750.355