Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g00842 ATGAGAGCTTCAAATGCCAAGTTTCTCATCTGGATTCTTTGTGCTTTATGTTTATCATCATCTCTCTTATCAGAATTCACTCCTGATGATAATTTTCTGATTGATTGTGGATCATCCTCCAATAATACAGTGGGAGATCGTTTATTTCTATCTGATAACAACCCAAATGGGAAATCTCTTTCCTCTACAAGTAAAGTATCTACTTCATCTGAATTGGACATGTTCTCATCTCTATTTCAAACTGCAAAAGTATTTGAAACAACTTTTCTATACAACTTCAAAATAAAGAAACAGGGTAGGCACTGGATCCGCCTCTACTTTTACCCTTTTGTTTCTGGGAACTTTAGCTTGAGTTTAGCTAAATTCTCAGTTTCTGCTCAAAACATCACACTTCTCAAAGAGTTTCAAATCAAAAGCGGCTCGATAATTAAGGAATATTCTCTGAATCTCACCTCTAGTAATCTTGTTCTTACATTTACTCCCATAGTGAATTCATTTGCCTTCATCAATGCCTTGGAAGTCGTTTCTGTTCCTGATGAACTGATTCCCTTGACTGTCACTGGCGTTGAGAAGGTTCAAAATAGTTTGGGGAACAGGGCACTGGAGACAGTTGCTAGAGTGAACATGGGCAATCAAACCGTGCTTCCGGATAATGATACTCTCTCGCGTCTTTGGGTTGCAGATGGTCCATTTTTGATGCATAATGATCAGGTTGTCGTTGGAAAGTTTGTGTCAAATCTCACAAAAGTGAATATGACAAGTGGTTTGGAAATTAAGGCTCCTCGTCTTGTGTATGGAACGGCAACTCGGTTAGGAGCTGATGCGGATACTTTTGTTAATGTCAATGTATCCTGGTCATTTGACGTTGATCCAGGATATGAATATCTGATTCGTTATCATTTCTGTGATATTATTGATCTTTCTCTCGGATCAATGATCTTCAATGTTTATGTTAATTCATGGAAGGTAGATCATCTTGATCTTGGTAATGTCACTTCAAATATCCCAGGTACACCCCATGTCCTGGACACCATAGCCAGTCCAATGGACAGCTCTAAGTTCAAAATAAGTGTTGGCCCTACCAATTTTCATGAATTCTCAACTGCCATTCTTAACGGGGTCGAGATTATGAAAATAAGTGATTCTCGGAGGAGCCTCGATGAACCCTCCTTTGGTTTAGACTCAAAGAAAGGTTCCAATGTAAAAGTTGGTCTTATAGCTGGCTTAGTTGCTGGACTGGTTGTTCTTGCTATTTTGGCCACTCTTGTCATTGTGCTTTCCAGAAGAAGAAGGAGATCAGCACTTGTCCGTCACTTGAAGGAAGAGGAAAATTTGGGTGTGAATGGTAGAGAATGCAACTATACCGTTGGATCCGTTGCCTTCTTGAACTCAAAGTTCGGTTATCGATATTCTCTTGCAGCTATTCAGGAAGCTACAGATAATTTTAGTGAAAGTTTAGCCATTGGAGTTGGCGGGTTTGGGAAAGTTTACAAGGGAATGTTGAGGGATAACACGGAAGTGGCAGTGAAAAGAGGAACTTCTAAATCCATGCAGGGTCTTGCAGAGTTTCAAACTGAAATCGAGATGTTATCCCAATTTCGCCACCGTCATTTAGTTTCTCTGATCGGGTACTGCGATGAGCAAAACGAGATGATTATAATTTACGAGTACATGGAAAAAGGGACCCTCAAGGACCATTTGTATGGATCAGAACTTCCAAGTTTAAGCTGGAAACAAAGGCTTGATATTTGCGTTGGCTCAGCTAGAGGACTTCACTATCTTCACACTGGCTCCACAAAGGCAATCATACACAGAGATGTCAAAACTGCAAACATTCTTCTTGATCAAAACTACATGGCCAAGGTTGCAGACTTTGGACTCTCGAAGATTGGCCCTGAATTTGACAAGACTCACGTCAGTACAGCAGTGAAAGGAAGCTTTGGCTATCTCGATCCTGAGTATTTAACGACGCAGCAACTGACCGAGAAATCAGATGTGTACTCTTTTGGGGTAGTTATGTTTGAAGTGCTTTGTGGTAGGCCTGTCATTGATCCATCTCTTCCAAGGGAAAAAGTGAATTTAATTGAATGGGTAATGAGAAGGAAGGACAAAGATCAATTAGAGGCGATTGTAGACGCTCGCATTATCGAACAAATCAAGCTAGAATCATTGAAAAAATATGTTGAAACAGCTGAGAAATGCTTGGCAGAATGCGGCATGGATCGTCCGACGATGGGAAACGTTCTGTGGAATCTGGAGTGTGCACTCCAACTCCAAGGGGATGAAAAATCCCGACATGGAAAGGAATCATCCTCACAAGCTGATCTTTCCAACCATTGGGAGGCAAGCGTATCAACGACTCAATTCAGCACGGGAAGCGCAGTTGATATAGCAAATATGTCGATGAGTAAAGTATTTGCTCAAATGGTGAGGGATGATATGAGATAG 2448 40.93 MRASNAKFLIWILCALCLSSSLLSEFTPDDNFLIDCGSSSNNTVGDRLFLSDNNPNGKSLSSTSKVSTSSELDMFSSLFQTAKVFETTFLYNFKIKKQGRHWIRLYFYPFVSGNFSLSLAKFSVSAQNITLLKEFQIKSGSIIKEYSLNLTSSNLVLTFTPIVNSFAFINALEVVSVPDELIPLTVTGVEKVQNSLGNRALETVARVNMGNQTVLPDNDTLSRLWVADGPFLMHNDQVVVGKFVSNLTKVNMTSGLEIKAPRLVYGTATRLGADADTFVNVNVSWSFDVDPGYEYLIRYHFCDIIDLSLGSMIFNVYVNSWKVDHLDLGNVTSNIPGTPHVLDTIASPMDSSKFKISVGPTNFHEFSTAILNGVEIMKISDSRRSLDEPSFGLDSKKGSNVKVGLIAGLVAGLVVLAILATLVIVLSRRRRRSALVRHLKEEENLGVNGRECNYTVGSVAFLNSKFGYRYSLAAIQEATDNFSESLAIGVGGFGKVYKGMLRDNTEVAVKRGTSKSMQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEQNEMIIIYEYMEKGTLKDHLYGSELPSLSWKQRLDICVGSARGLHYLHTGSTKAIIHRDVKTANILLDQNYMAKVADFGLSKIGPEFDKTHVSTAVKGSFGYLDPEYLTTQQLTEKSDVYSFGVVMFEVLCGRPVIDPSLPREKVNLIEWVMRRKDKDQLEAIVDARIIEQIKLESLKKYVETAEKCLAECGMDRPTMGNVLWNLECALQLQGDEKSRHGKESSSQADLSNHWEASVSTTQFSTGSAVDIANMSMSKVFAQMVRDDMR 815
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5641983 5645092 - MELO3C023810.2.1 Cme10g00842 339728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g00842 815 Pfam Malectin-like domain 34 379 IPR024788 -
Cme10g00842 815 SUPERFAMILY Protein kinase-like (PK-like) 464 752 IPR011009 -
Cme10g00842 815 PANTHER RECEPTOR-LIKE PROTEIN KINASE HERK 1 17 807 - -
Cme10g00842 815 Pfam Protein tyrosine and serine/threonine kinase 487 747 IPR001245 GO:0004672|GO:0006468
Cme10g00842 815 Gene3D - 31 177 - -
Cme10g00842 815 Gene3D - 199 380 - -
Cme10g00842 815 CDD STKc_IRAK 488 753 - -
Cme10g00842 815 SMART serkin_6 482 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme10g00842 815 ProSiteProfiles Protein kinase domain profile. 482 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme10g00842 815 ProSitePatterns Serine/Threonine protein kinases active-site signature. 602 614 IPR008271 GO:0004672|GO:0006468
Cme10g00842 815 PANTHER OS07G0166700 PROTEIN 17 807 IPR045272 GO:0004714|GO:0006468
Cme10g00842 815 ProSitePatterns Protein kinases ATP-binding region signature. 488 510 IPR017441 GO:0005524
Cme10g00842 815 Gene3D Phosphorylase Kinase; domain 1 449 557 - -
Cme10g00842 815 Gene3D Transferase(Phosphotransferase) domain 1 558 780 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme10g00842 Cme-Chr10:5641983 Cme11g01730 Cme-Chr11:25460130 0 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65208 PF12819 Malectin_like 3.50E-31 CL0202 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g00842 - - csv:101203398 1454.11