Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g00854 ATGGCCATCGAAGCTGCGGTCAAGGCTGCTGTTGGTGCACCGGACGAGATTGGGGACTGCCCTTTCAGTCAGAGGGTTCTCTTAACTTTGGAGGAGAAGAAAGTTCCTTACAAATTGCATCTCATCAATCTGTCCGACAAACCCAGTTGGTTCTTGAAAGTGAGCCCAGAAGGGAAAGTGCCGGTGGTGAAGTTTGATGACAAATGGGTTCCTGATTCTGATGTCATCGTGGGGATTCTTGAGGAGAAGTATCCAGAGCCTTCTCTTGTTACTCCTCCTCAATTTTCTTCTGTGGGATCGAAGATATTTAGTGCTTTTGGAAAATTCTTGAAAAGCAAGGACCCGAAGGATCATTCAGAGGAGGATTTACTTGTAGAGTTGAAGGCGCTCGATGAGCATCTTAAGGCTCATGATGGACCTTATGTTGCGGGAGAGAAGGTAACTGCTGTTGATTTGAGTCTGGCACCGAAGTTGTACCATGTTGATATTGCTCTTGGCCATTTTAAGAAGTGGTCTATCCCCAAAGAGTTGGCCAGTTTAATCGCCTACAAAGAGTTGCTTTTCGCTCGAGAATCTTTCGTGAAGACGAAAGCTACCCCAGAACATGTAATTGCTGGATGGGAGCCAAAGGTGAATCCTGCATGA 645 46.2 MAIEAAVKAAVGAPDEIGDCPFSQRVLLTLEEKKVPYKLHLINLSDKPSWFLKVSPEGKVPVVKFDDKWVPDSDVIVGILEEKYPEPSLVTPPQFSSVGSKIFSAFGKFLKSKDPKDHSEEDLLVELKALDEHLKAHDGPYVAGEKVTAVDLSLAPKLYHVDIALGHFKKWSIPKELASLIAYKELLFARESFVKTKATPEHVIAGWEPKVNPA 214
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5735347 5739662 + MELO3C023826.2.1 Cme10g00854 339740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g00854 214 SFLD Glutathione Transferase (cytosolic) 19 169 IPR040079 -
Cme10g00854 214 SUPERFAMILY Thioredoxin-like 19 87 IPR036249 -
Cme10g00854 214 SUPERFAMILY GST C-terminal domain-like 84 212 IPR036282 -
Cme10g00854 214 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 10 88 IPR004045 -
Cme10g00854 214 CDD GST_N_family 20 77 - -
Cme10g00854 214 PANTHER DEHYDROASCORBATE REDUCTASE 2 209 - -
Cme10g00854 214 Pfam Glutathione S-transferase, C-terminal domain 127 177 - -
Cme10g00854 214 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 2 209 IPR044627 GO:0033355|GO:0045174|GO:0098869
Cme10g00854 214 Gene3D Glutaredoxin 1 89 - -
Cme10g00854 214 Pfam Glutathione S-transferase, N-terminal domain 19 87 IPR004045 -
Cme10g00854 214 Gene3D - 90 214 - -
Cme10g00854 214 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 66 213 IPR010987 -
Cme10g00854 214 SFLD Main (cytGST) 19 169 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g01581 Cme-Chr6:15937634 Cme10g00854 Cme-Chr10:5735347 2.90E-92 dispersed
Cme10g00854 Cme-Chr10:5735347 Cme11g00039 Cme-Chr11:362417 3.11E-08 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g00854 K21888 - csv:101203666 394.43