Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g00876 ATGTCTTTCCAGCATAAAAGCTTTTGGATACCTAGGGATGCTGGATGTTTAACTGATGGAGAGATGAACTATGATAGCTCCTCCAGAATTGAAACCAAACGTGGCCATCAGTGGTTCATGGATGGCAGTGCACCAGAGCTATTCAGTAGCAAGAAGCAAGCAATTGAAGCTGTAAATTCTAGACCTGTTCCTGGAGTTCCACACATGAATGTTTCTCCCTGGGAAAACACTTCAAGTTTTCAGTCAGTCCCTGGCCACTTCACTGATCGTCTTTTTGGCTCAGAGCCAATACGAACTGTCAACTTGGTTGATAGAGGCATCTCTGTGGGAAATGCAAATATGGACATGGGAAGAAAGGAGTTTGAGAATCATTTTACAAACAACCCATCCGTTGGCTTGTCCATGTCCCAATCCATTGAGGATCCCTCATCATGCCTCAATTTTGGTGGAATTAGAAAAGTTAAAGTCAATCAAGTGAGGGATCCTGACGTTGGCATGCCTGCTTCTTTGGGGCATGGCTATAGTAGGGGTGATAATTGTACAATTTCGATGGGTTCAGGATTTAACAAAAACCATGAGAACACCATATCATTGGGCCAAACTTATAATAGTAGAGATGAGAATGCCATTTCGGTTGGCCCTGCATATCACAAGACAGATGACAATTTTATTTCAATGGGTCATGCTTTCAGCAAGGGCGATGGGAGTTTTATTACAATTGGTCATAACTATAGCAAGGGAGACAATAGCATCTTATCGATGAATCAGCCTTTTGACAAGGGGGATGACTCTTTTATTTCAATGGGTCAATCTTATGAGAAGGCTGAAGGAAATATCATCTCTTTTGCCTCCTACAATAAAGGGCAAGAAAATTTTATATCAATGGGGCCAGCCTATAGTAAGGCGGGTGATACTTTCATTTCAATGGCTTCATCCTTTAATAAGGGGAATGATGACAACTTATCCATGGCTCCAACCTATGACAAGGTGAACTCTGACATTGTACATGTCGGTCCTAAATTTGACAAAGCAGATTCTGGTGCTGTGTCAATGGCTCACAACTATCATAAGGGTGAGAGTAATACCATATCTTTTGGAGGTTTTGATGACGAGAATGGTACAGATAATCCTTCTGGTGGGATCATTAGCAGTTATGACTTGTTAATGGCTAATCAGGCTTCTGCCCAGGCATCAGAAGTATCAACCCTGAGAGACTCGGTTGATCCCAATGTGGAAGTAAACATTAACAATGCCATAAAGGTTGATGGAAAAATCGACACAAATTCCAAAAATAAAGAGCCGAGGATGAGTAAGAAGGTTCCACCAAATAGCTTCCCTTCAAATGTTAAAAGCTTGCTCTCCACTGGTATGCTTGATGGGGTTCCTGTGAAATATGTTTCTTGGTCACGGGAGAAAAATCTCAAGGGAATTATTAAAGGGACTGGATACTTGTGCAGTTGTGAGAACTGCAATCATGCAAAGGCTCTCAATGCTTATGAATTTGAGAGGCACGCTGGCTGCAAGACCAAACATCCAAATAACCATATTTACTTTGAGAACGGGAAAACTATCTATGCTGTTGTTCAAGAGCTAAAGAACACCCCTCAGGAGATGCTATTTGATGCAATCCAGAATGTGACTGGCTCTCCCATTAATCAGAAGAACTTCCGTATTTGGAAAGCATCGTATCAAGCTGCCACCCTTGAACTCCAGCGTATTTATGGAAAAGATGAAGTAATTATGCCTTCTTGA 1752 41.61 MSFQHKSFWIPRDAGCLTDGEMNYDSSSRIETKRGHQWFMDGSAPELFSSKKQAIEAVNSRPVPGVPHMNVSPWENTSSFQSVPGHFTDRLFGSEPIRTVNLVDRGISVGNANMDMGRKEFENHFTNNPSVGLSMSQSIEDPSSCLNFGGIRKVKVNQVRDPDVGMPASLGHGYSRGDNCTISMGSGFNKNHENTISLGQTYNSRDENAISVGPAYHKTDDNFISMGHAFSKGDGSFITIGHNYSKGDNSILSMNQPFDKGDDSFISMGQSYEKAEGNIISFASYNKGQENFISMGPAYSKAGDTFISMASSFNKGNDDNLSMAPTYDKVNSDIVHVGPKFDKADSGAVSMAHNYHKGESNTISFGGFDDENGTDNPSGGIISSYDLLMANQASAQASEVSTLRDSVDPNVEVNINNAIKVDGKIDTNSKNKEPRMSKKVPPNSFPSNVKSLLSTGMLDGVPVKYVSWSREKNLKGIIKGTGYLCSCENCNHAKALNAYEFERHAGCKTKHPNNHIYFENGKTIYAVVQELKNTPQEMLFDAIQNVTGSPINQKNFRIWKASYQAATLELQRIYGKDEVIMPS 583
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6131667 6137538 + MELO3C023841.2.1 Cme10g00876 339762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g00876 583 PANTHER AUTOIMMUNE REGULATOR 1 583 - -
Cme10g00876 583 Pfam Tify domain binding domain 476 531 IPR032308 -
Cme10g00876 583 MobiDBLite consensus disorder prediction 425 445 - -
Cme10g00876 583 PANTHER N-LYSINE METHYLTRANSFERASE 1 583 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme10g00876 Cme-Chr10:6131667 Cme11g01269 Cme-Chr11:19487711 2.11E-39 dispersed
Cme10g00876 Cme-Chr10:6131667 Cme04g02602 Cme-Chr4:31970247 4.88E-45 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g00876 - - csv:101206313 1179.85