Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme10g00915 | ATGGCGAATCGATGGTGGGCTGAAAACATACCCACCACCACAGATAGCAGCACCAGCAACCCTTATTCGACTCCATTAAAGCAAAGCTTAGAAGCTGCTGATGAAGAGAACAACTCCGGTAGCCATGAAAGAGCCGAACCAGGCACCAGTTCAAGCACGCGCCGCCCTCGTGGCCGGCCGCCGGGATCTAAGAACAAGCCGAAACCACCGGTGGTGGTCACTAAGGAGAGCCCCGATGCCCTTCGGAGCCACGTTTTGGAAATTGGTAGCGGCAGCGACATCGTCGAAAGCATCTCGAACTTTGCCCAGCGCCGGCAGCGAGGAGTTTCGGTTCTCAGTGGAAATGGGGTTGTTGCCAACGTTACTCTCCGGCATCCGGGTGCCTCTGGCGGTGTTATTACGCTACAGGGTCGATTTGATATATTGTCGCTCTCGGGTGCTTTTTTGCCTGCCCCAGCTCCACCGGGTGCTACTGGATTAACTGTCTACTTGGCTGGCGGGCAGGGGCAGGTGGTTGGCGGCATTGTCGTTGGTGCACTCGTGGCAACCGGTCCAGTTATTGTAATAGCTGCCACTTTCACCAATGCGACATTTGAGCGGCTGCCGCTCGAGGACGAGGAGGTTGCCGCAGGAGATAAGTCTGGAACTAGCCAGAACAATTCAACATCTCAGAGCATGGGGGAGCAACAGCAACAGCCGCCATCAATGGGAGTTTACAATATGGCTCCAAATTTGGTGGCAAATGGTCAGGTTTCTTCACATGATATGATTTGGAGTCTTCCTAGAGCCCCACCTCCGTTTTAA | 804 | 54.35 | MANRWWAENIPTTTDSSTSNPYSTPLKQSLEAADEENNSGSHERAEPGTSSSTRRPRGRPPGSKNKPKPPVVVTKESPDALRSHVLEIGSGSDIVESISNFAQRRQRGVSVLSGNGVVANVTLRHPGASGGVITLQGRFDILSLSGAFLPAPAPPGATGLTVYLAGGQGQVVGGIVVGALVATGPVIVIAATFTNATFERLPLEDEEVAAGDKSGTSQNNSTSQSMGEQQQQPPSMGVYNMAPNLVANGQVSSHDMIWSLPRAPPPF | 267 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 6686355 | 6687224 | - | MELO3C023881.2.1 | Cme10g00915 | 339801 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme10g00915 | 267 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - | |
Cme10g00915 | 267 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 79 | 208 | - | - | |
Cme10g00915 | 267 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 82 | 195 | IPR005175 | - | |
Cme10g00915 | 267 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 17 | 261 | - | - | |
Cme10g00915 | 267 | MobiDBLite | consensus disorder prediction | 207 | 241 | - | - | |
Cme10g00915 | 267 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 17 | 261 | IPR014476 | GO:0003680 | |
Cme10g00915 | 267 | MobiDBLite | consensus disorder prediction | 1 | 78 | - | - | |
Cme10g00915 | 267 | Gene3D | - | 81 | 210 | - | - | |
Cme10g00915 | 267 | ProSiteProfiles | PPC domain profile profile. | 78 | 216 | IPR005175 | - | |
Cme10g00915 | 267 | MobiDBLite | consensus disorder prediction | 212 | 238 | - | - | |
Cme10g00915 | 267 | MobiDBLite | consensus disorder prediction | 43 | 58 | - | - | |
Cme10g00915 | 267 | PIRSF | ESCAROLA | 7 | 265 | IPR014476 | GO:0003680 | |
Cme10g00915 | 267 | CDD | DUF296 | 82 | 165 | IPR005175 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cme03g00178 | Cme10g00915 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme02g00745 | Cme-Chr2:9389020 | Cme10g00915 | Cme-Chr10:6686355 | 8.07E-34 | dispersed | |
Cme02g01693 | Cme-Chr2:24024980 | Cme10g00915 | Cme-Chr10:6686355 | 3.13E-67 | dispersed | |
Cme03g00178 | Cme-Chr3:2169055 | Cme10g00915 | Cme-Chr10:6686355 | 2.06E-65 | dispersed | |
Cme04g00240 | Cme-Chr4:1892465 | Cme10g00915 | Cme-Chr10:6686355 | 9.92E-38 | dispersed | |
Cme05g01816 | Cme-Chr5:27058920 | Cme10g00915 | Cme-Chr10:6686355 | 4.81E-80 | dispersed | |
Cme06g00250 | Cme-Chr6:1512743 | Cme10g00915 | Cme-Chr10:6686355 | 6.40E-62 | dispersed | |
Cme10g00915 | Cme-Chr10:6686355 | Cme11g02481 | Cme-Chr11:31446850 | 3.59E-67 | dispersed | |
Cme10g00915 | Cme-Chr10:6686355 | Cme06g00517 | Cme-Chr6:3249890 | 5.38E-73 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme10g00915 | - | - | csv:101217530 | 423.32 |