Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g00974 GATGCGTCAAAATCTCTAGTGTATAGCTATCACCGGAGCTTCAGCGGCTTTGCAGCCAGGCTCAACAACGATGAAGCTCGAAAACTCGCTGAGATGGATGAAGTTGTTTCTGTGTTTCCAAGTGAAAAATACCAACTCCACACGACAAGATCATGGGATTTCATGGGTTTCTTCCAACAAGTTCCTAGAACAACCTTGGAGAGTGATTTGATCATTGGAATGTTGGATACCGGAATTTGGCCGGAATCTAAAAGCTTTTCCGATGAAGGCTTTGGCCCACCGCCATCTAAATGGAAAGGCGAATGCAAACCCAACTTAAATTTCACTTGCAACAATAAAATAATTGGAGCTCGATTCTTCCGGAGTGAGCCTCTCAGCGGAGCCGATATTCTTTCTCCAAGAGACACAAAAGGCCATGGAACCCACACCTCTTCCACTGCCGGCGGCAATTTTGTCTCCGGTGCCAACCTCTTCGGCCTTGCCGCCGGCACCTCTAGGGGTGGCGTTCCCTCCGCCCGCATTGCTGTCTACAAAATTTGCTGGTCAGATGGTTGCTTTAGCGCTGACATCCTCGCAGCTTTCGACCATGCAATTGCTGATGGTGTCGACATCATCTCCATTTCCGTCGGATTTTTTTTCTCCAAGAATTACTTCAACGATTCAATTGCTATTGGGGCTTTCCACGCAATGAAGAATGGGATTCTGACGTCAAATTCCGGTGGCAATTCTGGCCCTAGCCTTGGTAGTATCACTAATGTTTCTCCATGGTCGTTATCGGTGGCTGCTAGCACTATCGATAGGAAGTTTGTGACTAAAGTGACGTTGGGTAATGGAGAATCCTTTCACGGGATCTCTCTGAACACATTCGATGTTGGAGATAAGTTGTTTCCACTTATTCATGCTGGCGATGCTCCTAATACAACTGCAGGTTTCAGTAGATCAATATCAAGGTTATGCTTCCCTGGTTCTTTGGACGTGGACAAAGTTCGGGGGAAGATTGTTATATGCGATTTGAACAGTGACGGAGAAGCAGCCCTGATTAGTGGTGCGGTTGGTTCAATAATGCAAGTTCCTGCCCTCCCAGAAGTTGCCTTTCTTTTCCCTCTACCTATTTCGTTGATAAACTTAAACGCTGGAAAGAATGTTTTCCAGTACCTGAGATCAAACAGCAACCCAGAAGCTATCATAGAAAAGAGTACTACCATCGAGGATCTGTCTTCTCCATCTGTAGTTCCCTTCTCATCGAGGGGTCCTAGTATAATTACACTGGACATTCTCAAGCCTGATTTAGCAGCACCAGGAGTGGATATATTAGCATCTTGGTCTGAAGGCACACCAATCACAGGTGTAGTAGGGGATAACCGAATAGCTCCATTTAACATAATCTCTGGCACATCCATGTCTTGCCCACATGCAACAGGAGCGGCTGTCTATGTCAAATCCTTCCACCCAACTTGGTCTCCTGCTGCTATTAAGTGA 1479 46.25 DASKSLVYSYHRSFSGFAARLNNDEARKLAEMDEVVSVFPSEKYQLHTTRSWDFMGFFQQVPRTTLESDLIIGMLDTGIWPESKSFSDEGFGPPPSKWKGECKPNLNFTCNNKIIGARFFRSEPLSGADILSPRDTKGHGTHTSSTAGGNFVSGANLFGLAAGTSRGGVPSARIAVYKICWSDGCFSADILAAFDHAIADGVDIISISVGFFFSKNYFNDSIAIGAFHAMKNGILTSNSGGNSGPSLGSITNVSPWSLSVAASTIDRKFVTKVTLGNGESFHGISLNTFDVGDKLFPLIHAGDAPNTTAGFSRSISRLCFPGSLDVDKVRGKIVICDLNSDGEAALISGAVGSIMQVPALPEVAFLFPLPISLINLNAGKNVFQYLRSNSNPEAIIEKSTTIEDLSSPSVVPFSSRGPSIITLDILKPDLAAPGVDILASWSEGTPITGVVGDNRIAPFNIISGTSMSCPHATGAAVYVKSFHPTWSPAAIK 492
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7636064 7642088 + MELO3C023919.2.1 Cme10g00974 339860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g00974 492 Gene3D - 266 403 - -
Cme10g00974 492 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 47 IPR037045 -
Cme10g00974 492 Gene3D Peptidase S8/S53 domain 69 492 IPR036852 GO:0004252|GO:0006508
Cme10g00974 492 CDD PA_subtilisin_like 273 396 - -
Cme10g00974 492 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 492 IPR045051 -
Cme10g00974 492 CDD Peptidases_S8_3 44 492 IPR034197 -
Cme10g00974 492 SUPERFAMILY Subtilisin-like 50 492 IPR036852 GO:0004252|GO:0006508
Cme10g00974 492 PANTHER PUTATIVE-RELATED 2 492 - -
Cme10g00974 492 Pfam Subtilase family 68 492 IPR000209 GO:0006508|GO:0008236
Cme10g00974 492 PRINTS Subtilisin serine protease family (S8) signature 463 479 IPR015500 -
Cme10g00974 492 PRINTS Subtilisin serine protease family (S8) signature 67 86 IPR015500 -
Cme10g00974 492 PRINTS Subtilisin serine protease family (S8) signature 135 148 IPR015500 -
Cme10g00974 492 ProSiteProfiles Serine proteases, subtilase domain profile. 51 492 - -
Cme10g00974 492 Pfam Peptidase inhibitor I9 3 47 IPR010259 -
Cme10g00974 492 ProSitePatterns Serine proteases, subtilase family, serine active site. 464 474 IPR023828 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme10g00974 Cme-Chr10:7636064 Cme10g00976 Cme-Chr10:7674898 0 dispersed
Cme10g00973 Cme-Chr10:7601960 Cme10g00974 Cme-Chr10:7636064 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g00974 - - bhj:120081032 838.565