Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g00976 TTAACTCTTCAAACCAACTTTGTTGATTTCAGTGATGCATCAAAATCTCTAGTGTATAGCTACCACCGAAGCTTCAGCGGCTTTGCAGCCAGGCTCAACGACGACGAGGCTCGAAAACTTGCGGAGATGGATGGAGTTGTTTCTGTGTTTCCAAGTGAAAAAAAACAACTTCACACAACAAGATCATGGGATTTCATGGGTTTCTTCCAAGAAGCTCCAAGAAAAAGATTGGAGAGTGATTTGATCATCGGAATGTTGGATACCGGAATTTGGCCAGAATCTAAAAGCTTTTCTGATGAAGGCTTTGGTCCGCCGCCATCTAAATGGAAAGGCGAATGCGCTCATAATTTCACATGCAACAACAAAATAATCGGAGCTCGATTCTTTCGGAGTGAGCCTGTCATCGGAGATAGTCCTTCTCCGAGAGATACAGAAGGCCATGGAACTCACACCTCATCCACCGCCGGCGGTAATTTGGTCACCGACGCCAACCTCTTCGGCCTCGCCGCCGGCACCTCTCGGGGCGGCGCTCCCTCCGCCCGCATTGCTGTCTACAAGATTTGCTGGTCGAATGGTTGCCCCGACGCCGACATCCTCGCAGCTTTTGACCATGCAATCGCTGATGGTGTCGACATCATCTCCATTTCTGTCGGAGGTTTTGGCGCCAGCAATTACTTAGACGATCCAATTGCCATTGGGGCTTTTCATGCAATGAAGAATGGGATTCTGACGTCAAATTCCGGTGGCAATTCTGGCCCCAACCTTGGTAGTCTCTCTAATGTTTCTCCATGGTCGTTATCGGTGGCTGCTAGCACTATCGATAGGAAGTTTGTGACTAAAGTGACGTTGGGTAATGGAGAATCCATTCAGGGGATCTCTGTGAACACCTTCGAACTTGGAGATAAATTGTTTCCACTTATTCATGCTGGTGATGCTCCTAATACAACTGCAGGTTTCAATGGATCAACATCAAGGTTATGCTTCCCAGGCTCTTTGGACGTGGATAAAGTTCAGGGAAAGATTGTTATATGCGATTTGATCAGTGGCGGAGATGTAACCCAGAGTAGTGGTGCGGTTGGTACAGTAATGCTAGATTCTGGCTTCCAAGACGTTGCTTTTCTTTTTCCCCAACCTGTTTCCTTAATAAGCTTCCACACTGGAAAAAGTCTTTTCCAGTACCTGAGATCTAACAGCAACCCAGAAGCTATCATAGAAAAGAGCACTACCATTGAGGATCTGTCTGCTCCATCTGTAGTTTCCTTTTCTTCGAGGGGTCCTAACGTAATTACGCTGGACATTCTCAAGCCTGATTTGGCAGCACCAGGAGTGGATATAATAGCATCTTGGTCTGAAGCCACATCAATCACAGGTGTAGAAGGGGATAAACGAATAGCTCCATTTAACATAATCTCTGGCACATCCATGTCTTGCCCACATGCAACAGGAGCGGCTGCCTATGTCAAATCCTTCCATCCATCTTGGTCTCCAGCTGCTATTAAGTCAGCACTTATGACAAGTGCTTTTCCCATGAGTCCAAAGTTGAACACAGATGCTGAGTTGGCATATGGAGCAGGTCACTTAAATCCAGTAAATGCCATTAACCCTGGTTTAGTCTATGATGCTGAAGAGCTTGACTACATAAAGTTCTTATGTGGGCAAGGATATAGTACAAAAGATCTTCGTCTTGTTTCGGGTGACCATAGCAACTGTTCGGATGTTACAAAAACAGCTGCATCAGATCTAAACTATCCATCTTTTGGTCTAGTAATCAATTCTACAAGTCAAAGATTGATTAGTCGTGTCTACCACAGGACCGTCACAAATGTCGGGCTGCCAGTCTCAACTTATAAGGCAGTTATTAAAGCTCCGCCGGGGCTCAAAGTTACAGTACGTCCTGCTACTCTTTCTTTCCGTTCTCTTGGACAAAAGATATCCTTCACAGTGACTGTGAGGGCTAAAGCAGATGTTGCCGGAAAGGTGGTCTCTGGTAGCTTAACCTGGGATGATGGAGTGCATCTGGTGAGGAGCCCCATTGTTTCATTTGTTATTCCATAA 2055 45.89 LTLQTNFVDFSDASKSLVYSYHRSFSGFAARLNDDEARKLAEMDGVVSVFPSEKKQLHTTRSWDFMGFFQEAPRKRLESDLIIGMLDTGIWPESKSFSDEGFGPPPSKWKGECAHNFTCNNKIIGARFFRSEPVIGDSPSPRDTEGHGTHTSSTAGGNLVTDANLFGLAAGTSRGGAPSARIAVYKICWSNGCPDADILAAFDHAIADGVDIISISVGGFGASNYLDDPIAIGAFHAMKNGILTSNSGGNSGPNLGSLSNVSPWSLSVAASTIDRKFVTKVTLGNGESIQGISVNTFELGDKLFPLIHAGDAPNTTAGFNGSTSRLCFPGSLDVDKVQGKIVICDLISGGDVTQSSGAVGTVMLDSGFQDVAFLFPQPVSLISFHTGKSLFQYLRSNSNPEAIIEKSTTIEDLSAPSVVSFSSRGPNVITLDILKPDLAAPGVDIIASWSEATSITGVEGDKRIAPFNIISGTSMSCPHATGAAAYVKSFHPSWSPAAIKSALMTSAFPMSPKLNTDAELAYGAGHLNPVNAINPGLVYDAEELDYIKFLCGQGYSTKDLRLVSGDHSNCSDVTKTAASDLNYPSFGLVINSTSQRLISRVYHRTVTNVGLPVSTYKAVIKAPPGLKVTVRPATLSFRSLGQKISFTVTVRAKADVAGKVVSGSLTWDDGVHLVRSPIVSFVIP 684
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7674898 7680709 + MELO3C026563.2.1 Cme10g00976 339862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g00976 684 Pfam Subtilase family 79 524 IPR000209 GO:0006508|GO:0008236
Cme10g00976 684 Gene3D - 550 682 - -
Cme10g00976 684 SUPERFAMILY Subtilisin-like 57 537 IPR036852 GO:0004252|GO:0006508
Cme10g00976 684 ProSiteProfiles Serine proteases, subtilase domain profile. 62 533 - -
Cme10g00976 684 CDD PA_subtilisin_like 281 404 - -
Cme10g00976 684 ProSitePatterns Serine proteases, subtilase family, serine active site. 472 482 IPR023828 -
Cme10g00976 684 MobiDBLite consensus disorder prediction 135 156 - -
Cme10g00976 684 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 2 58 IPR037045 -
Cme10g00976 684 Gene3D - 274 411 - -
Cme10g00976 684 PANTHER PUTATIVE-RELATED 9 681 - -
Cme10g00976 684 PRINTS Subtilisin serine protease family (S8) signature 78 97 IPR015500 -
Cme10g00976 684 PRINTS Subtilisin serine protease family (S8) signature 143 156 IPR015500 -
Cme10g00976 684 PRINTS Subtilisin serine protease family (S8) signature 471 487 IPR015500 -
Cme10g00976 684 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 9 681 IPR045051 -
Cme10g00976 684 CDD Peptidases_S8_3 55 507 IPR034197 -
Cme10g00976 684 Pfam Fibronectin type-III domain 580 679 IPR041469 -
Cme10g00976 684 Gene3D Peptidase S8/S53 domain 80 546 IPR036852 GO:0004252|GO:0006508
Cme10g00976 684 Pfam Peptidase inhibitor I9 11 58 IPR010259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme10g00973 Cme-Chr10:7601960 Cme10g00976 Cme-Chr10:7674898 0 dispersed
Cme10g00974 Cme-Chr10:7636064 Cme10g00976 Cme-Chr10:7674898 0 dispersed
Cme10g01527 Cme-Chr10:19335682 Cme10g00976 Cme-Chr10:7674898 0 dispersed
Cme10g01530 Cme-Chr10:19427375 Cme10g00976 Cme-Chr10:7674898 0 dispersed
Cme10g00975 Cme-Chr10:7641386 Cme10g00976 Cme-Chr10:7674898 7.02E-113 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g00976 - - csv:101216595 1222.22