Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme10g01049 | ATGGAAGGGAAGGAGGAAGATGTTAGACTTGGAGCTAACAAATTCAACGAGAGACAGCCGATTGGAACGGCGGCCCAGAGTCAAGATGACGCTAAGGACTACAAGGAGCCACCGCCGGCCCCGTTGTTTGAGCCAGAAGAGCTCACTTCATGGTCCTTCTACAGAGCTGGAATTGCCGAGTTTTTCGCTACTTTCCTCTTCCTCTACATCACCGTTTTGACCGTCATGGGTGTCGTCCGGTCCAAGAATATTGAGGGGAACACGTGTAAGACAGTCGGAATTCAGGGTATTGCTTGGGCATTCGGCGGTATGATTTTTGCTCTGGTTTACTGTACTGCTGGAATTTCCGGTGGGCACATTAACCCGGCGGTGACTTTCGGGCTGTTTCTGGCGAGGAAGCTGTCGTTGACTAGGGCGATTTTCTACATGGTGATGCAGTGCCTTGGTGCCATCTGCGGTGCTGGTGTGGTGAAGGGGTTCCAACCCAAGCTCTACGACACCCTCGGCGGCGGAGCTAACATTGTGAGCGAGGGATACACCAAAGGAGACGGCCTTGGCGCTGAGATTGTTGGTACTTTCATCCTTGTTTACACCGTCTTCTCGGCCACCGATGCTAAACGTAGCGCCAGAGATTCACATGTTCCGATATTGGCACCATTGCCAATCGGATTTGCAGTGTTCTTAGTTCACTTAGCCACCATTCCGATAACGGGCACCGGCATCAACCCAGCCCGGAGCTTGGGAGCCGCCATTATTTACAACAACGAGAAAGCATGGGATGATCACTGGATATTCTGGGTGGGACCTTTCATCGGCGCTGCTCTTGCAGCTCTGTACCACCAAGTTGTAATCAGAGCCATCCCTTTCAAGTCCAAAAATTGTTGTGGAAGTGGCGATGAATTAAGATACCAATGGATTTGA | 921 | 51.36 | MEGKEEDVRLGANKFNERQPIGTAAQSQDDAKDYKEPPPAPLFEPEELTSWSFYRAGIAEFFATFLFLYITVLTVMGVVRSKNIEGNTCKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYMVMQCLGAICGAGVVKGFQPKLYDTLGGGANIVSEGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNNEKAWDDHWIFWVGPFIGAALAALYHQVVIRAIPFKSKNCCGSGDELRYQWI | 306 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 8898455 | 8900206 | - | MELO3C025164.2.1 | Cme10g01049 | 339935 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme10g01049 | 306 | Pfam | Major intrinsic protein | 47 | 280 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme10g01049 | 306 | SUPERFAMILY | Aquaporin-like | 46 | 285 | IPR023271 | - | |
Cme10g01049 | 306 | TIGRFAM | MIP: MIP family channel proteins | 59 | 280 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme10g01049 | 306 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 1 | 292 | IPR034294 | - | |
Cme10g01049 | 306 | ProSitePatterns | MIP family signature. | 119 | 127 | IPR022357 | - | |
Cme10g01049 | 306 | PRINTS | Major intrinsic protein family signature | 223 | 245 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme10g01049 | 306 | PRINTS | Major intrinsic protein family signature | 55 | 74 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme10g01049 | 306 | PRINTS | Major intrinsic protein family signature | 187 | 205 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme10g01049 | 306 | PRINTS | Major intrinsic protein family signature | 101 | 125 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme10g01049 | 306 | PRINTS | Major intrinsic protein family signature | 263 | 283 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme10g01049 | 306 | PRINTS | Major intrinsic protein family signature | 138 | 157 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme10g01049 | 306 | PANTHER | AQUAPORIN PIP1-2-RELATED | 1 | 292 | - | - | |
Cme10g01049 | 306 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - | |
Cme10g01049 | 306 | Gene3D | Glycerol uptake facilitator protein. | 40 | 295 | IPR023271 | - | |
Cme10g01049 | 306 | CDD | MIP | 55 | 283 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme09g01771 | Cme-Chr9:22174537 | Cme10g01049 | Cme-Chr10:8898455 | 0 | dispersed | |
Cme10g01049 | Cme-Chr10:8898455 | Cme10g01052 | Cme-Chr10:8922839 | 0 | dispersed | |
Cme10g01051 | Cme-Chr10:8905000 | Cme10g01049 | Cme-Chr10:8898455 | 4.24E-57 | dispersed | |
Cme10g01049 | Cme-Chr10:8898455 | Cme10g01050 | Cme-Chr10:8903991 | 5.16E-130 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme10g01049 | K09872 | - | csv:101214512 | 568.926 |