Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g01069 ATGGCTTTCTTCTCCTTTTTCTTCTTCTTTTTCCTTTCCTCTGTTTTGGCTTCTTCTCTGTTTCTCCTACTCCGTCCGGCCAGATTCCGCCGTATGAGGCTGCCACCGGGGACTCTCGGGCTTCCCCTGATCGGAGAGACCCTTCAAATCATCTCCGCCTACAAGACCGAGAACCCTGAACCCTTCATCGACGAACGGGTGCGGAAATATGGATCGGTTTTTACGACGCATTTGTTTGGTGAACCGACGGTTTTCTCAGCCGATTGGGAAACGAACCGGTTTATTCTTCAGAATGAAGAGAAGCTTTTTGAGTGTAGTTACCCCGGTTCGATTTCTAACCTTCTCGGGAAGCATTCTTTGTTGCTTATGAAAGGAAGTTTACATAAAAGAATGCATTCTTTGACTATGAGTTTTGGAAATTCTTCGATTCTTAGAGACCATCTTTTGGCCGATGTGGACCGGTTGATCCGGCTCAATTTGGACTCTTGGTCCGGCCGGATCGTTCTCATGGAAGAAGCTAAAAAGATAACATTTGAGTTAGCAGTGAAGCAATTGATGAGCTTTGATCGCTGTGAATGGACTCAAAGTCTCATGAAACAATATCTTCTTGTCATTGAAGGATTTTTTACCGTTCCTCTCCCTCTTTTTTCATCCACTTACCGTCGAGCCATCCAGGCCCGGAGGAAGGTGGCGGAGCAATTGGGGACGGTGGTGCGGGAGCGGAGGAAGGAAAGTGAGGACGGGTTGGGGAAGAAGGACATGCTGGGTGCGCTGCTGGCCGGAGAAGACGCCCTCTCCGACGAGCAAATAGTGGATTTTTTACTGGCTTTATTGGTGGCGGGATATGAAACGACGTCAACTACGATGACGCTGGCCGTTAAGTTTCTGACGGAGACGCCGCTGGCTTTGGCCCAATTACAGGAAGAGCACCAACAAATCAAAGCAAGAATGAAGGAATCACACCAACACCTCCAATGGAATGATTACAAGTCCATGCCTTTCACCCAATGTGTTGTGAATGAAACATTAAGAGTTGCGAACATAATCAGTGGGGTATTTAGAAGAGCAATGACAGATGTAAACATCAAAGGTTATACGATTCCGAAAGGATGGAAGGTTTTCGCATCATTTCGTGCAGTACATATGGACCATGAGCATTTCAAAGATGCACGTTCTTTTAACCCATGGAGATGGCAAAAGCAGAATAGCTCGGGCTCAACGACATTAAATGCATTTACACCGTTTGGTGGAGGTTCAAGATTGTGCCCAGGTTACGAGCTGGCCAGAGTAGAACTCTCTGTTTTCCTTCATCATCTTGTCACCCAATTCAGGTACTCATCTACCTGCTCAAACATAGTTTAA 1362 46.48 MAFFSFFFFFFLSSVLASSLFLLLRPARFRRMRLPPGTLGLPLIGETLQIISAYKTENPEPFIDERVRKYGSVFTTHLFGEPTVFSADWETNRFILQNEEKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFGNSSILRDHLLADVDRLIRLNLDSWSGRIVLMEEAKKITFELAVKQLMSFDRCEWTQSLMKQYLLVIEGFFTVPLPLFSSTYRRAIQARRKVAEQLGTVVRERRKESEDGLGKKDMLGALLAGEDALSDEQIVDFLLALLVAGYETTSTTMTLAVKFLTETPLALAQLQEEHQQIKARMKESHQHLQWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDVNIKGYTIPKGWKVFASFRAVHMDHEHFKDARSFNPWRWQKQNSSGSTTLNAFTPFGGGSRLCPGYELARVELSVFLHHLVTQFRYSSTCSNIV 453
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 9321685 9328591 + MELO3C025183.2.1 Cme10g01069 339955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g01069 453 PANTHER CYTOCHROME P450 90A1 13 447 - -
Cme10g01069 453 PRINTS P450 superfamily signature 337 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g01069 453 PRINTS P450 superfamily signature 413 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g01069 453 PRINTS P450 superfamily signature 422 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g01069 453 PRINTS P450 superfamily signature 280 297 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g01069 453 Pfam Cytochrome P450 194 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g01069 453 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506|GO:0016705
Cme10g01069 453 Coils Coil 303 323 - -
Cme10g01069 453 Gene3D Cytochrome P450 24 451 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g01069 453 PRINTS E-class P450 group I signature 269 286 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g01069 453 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g01069 453 PRINTS E-class P450 group I signature 289 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g01069 453 PRINTS E-class P450 group I signature 412 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g01069 453 PRINTS E-class P450 group I signature 336 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g01069 453 PRINTS E-class P450 group I signature 376 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g01069 453 PRINTS E-class P450 group I signature 422 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g01069 453 SUPERFAMILY Cytochrome P450 28 447 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g01069 453 PANTHER CYTOCHROME P450 26 13 447 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g02852 Cme-Chr1:35383310 Cme10g01069 Cme-Chr10:9321685 1.64E-122 dispersed
Cme06g01445 Cme-Chr6:13470519 Cme10g01069 Cme-Chr10:9321685 1.25E-73 dispersed
Cme07g00357 Cme-Chr7:2295995 Cme10g01069 Cme-Chr10:9321685 1.12E-90 dispersed
Cme07g01717 Cme-Chr7:22681208 Cme10g01069 Cme-Chr10:9321685 4.42E-117 dispersed
Cme08g00892 Cme-Chr8:5856568 Cme10g01069 Cme-Chr10:9321685 3.07E-112 dispersed
Cme09g00202 Cme-Chr9:1562626 Cme10g01069 Cme-Chr10:9321685 4.68E-101 dispersed
Cme12g01766 Cme-Chr12:24288401 Cme10g01069 Cme-Chr10:9321685 2.96E-81 dispersed
Cme10g01069 Cme-Chr10:9321685 Cme04g01196 Cme-Chr4:16338502 4.55E-123 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g01069 K09588 - csv:101216594 800.816