Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g01081 ATGACGACTTTATCCTCTCCCCCCCTCGCCCTCGCCGTCCTCACTCTCATCGCTGTCGTTTTTCCCCTGTTCCCGGCGATCCAAGCTCTCGGTTCAGCCTCTACTCTTGCTGTTAGCTACGGCTCCCGCACCGTCTGTGGCATCGTCGCCGAGCAGCCGACTCAAAGGATTTTGTGTTTCCGTGACGGTCAAACCATTTTTATCGAACCCCATGTATCCTTCTCCGCTGTATCCGGTGGTCGGAATATTTTCTGCGGTATAAGGTCCGGCGGCTACACTCTACTCTGTTGGGGCTTCAACTCGACCAACGCTGCGTTTACCCGGAGAAGACTTTACTATAACCCCAACGTTCTTCTCGAGAATCTCGCAGTCGGCGACGACCAAATCTGCGCGACGGTGGTTGGTGCCGGCAATGTAACTTGCTGGCGAGATGGTAACAACGCGAGAGGTGAGTTTTCTTCTGTTCAATATGATTCAATCTCTTCTGGGTACGGGTTTTCTTGTGGGATTTTGAAAGGGAATCAATCTGTTCGATGTTGGGGTAGAAATTCGTCGATTGCAACCGAAATCGAAGATGGGTTTCGAAATATTTCAATGTTGAGTATCGTCGCAGGTGGGTTTCATGTTTGTGGATTGAATATCTCTGGTGGGTTAGTTTGTAAAGGGAATAATGATTTTGGGCAGTTGGATTTTCCTTCAAATTCTTCCGTGGAGTTCTCTGAATTAGCTCTCGGTGAACGCCATAGCTGTGGGATTTTAGTCTCGAATCGATCGGTAATTTGTTGGGGTGGCTTGGGATTTTCTATTGATTCGATTCGTGAAACTTCGTTTGAATTAATTTCCTCAGGATCTGATTTTGTTTGTGGTTTAACAACGAGTAATTTCTCTGTTCTTTGTTGGGGGCCTGGTTGGTCCAATAATTCTTCAAGTCCTTCTTCACTTTCTCTTCCTAAGATTCTTCCTGGTCCTTGTGTTCTTCTATCTTCTTGTAGTTGTGGGGTTTATCCTTTATCTCAAACCCTCTGTTCTAACTCTGGGAATGTCTGTAATCGCTGTTTGTTTACTGTTCCAACGCCATCGTCGCCGGAACCATTGCCTTCCTCACCTCCACAGTCGCCACCGGGGACGACCCCGTCATCTCCGCCAGCTGCCTTGAGAAAAGGTTTGTTGGCATTTGGTATTGTGGGCTCAGTTGGGGCCTTTGCTGGGATTTGCACAATTATTTACTGTTTGTGGACCGGTGTTTGTTTTGGGAATAAGAAGATACATAACTCTGTTCAGCCTACCATCACTAGAGCTGCTAGTTCTAATGGTGGAACGACAACGTCAAACACAAACAACAGCCCTCCGTCGCGGTCGTCGACAATACGGCGTCAAGGTTCACGGATAATGCGAAGGCAGAGGAGTGGTACATCGTCCAAGCATGCAGATAGAGCAGAAGAATTTACTCTAGCGGAGCTTGCCATGGCTACTAATGATTTCTCACCTGAGAATAAGATTGGTGAGGGGAGCTTCGGTGTCGTGTACCGAGGGAAACTGTACGATGGTCGGGAAGTTGCGATAAAGAGAGGTGAAACGGGGCAGAAAACTAAGAAGTTCCAGGAGAAAGAGAGTGCTTTTGATTCAGAATTGGCGTTCTTGTCTAGGCTCCATCATAAGCATTTGGTTAGGCTTGTTGGGTATTGTGAAGAGAAGGATGAGAGGTTGTTGGTTTATGAATATATGAAAAATGGCGCACTTTATAATCATCTTCATGACAAGAACAACATTGAGAAAGCTAGTAGTGTTGTAAATTCTTGGAAAATGAGGATCAAAATAGCTTTAGATGCAGCTAGAGGGATTGAATATCTTCATAACTATGCAGTCCCTCCCATCATCCATAGAGATATTAAATCATCCAATATTCTCCTCGATGCAAATTGGACGGCCAGGGTATCTGATTTTGGGTTGTCATTGATGAGTCCAGGGTCGGATCGTGATTATCGGCCGACGAAGGCAGCTGGGACGGTTGGTTATATCGATCCTGAGTACTATGGATTGAATGTTTTGACTGCTAAGAGTGATGTGTATGGGCTTGGGGTGGTGTTGTTGGAGCTTTTGACAGGGAAGAGAGCTATATTCAAGGATGAGGAACAGGGAGGGACACCGGTGAGTGTGGTCGATTATGCGGTGCCAGTGATTATGGCGGGAGAATTAGAGAAGATTTTGGATCAAAGAGTCGGACCACCGCAGATCAACGAAGCGGAGGCAGTGGAGCTAGTGGCTTACACGGCGATGCATTGTGTGCATTTGGAAGGGAAAGATCGACCGACGATGACCGACATTGTTGCTAATTTGGAACGAGCTTTGAATCTCTGTGATGATAGCCATGGTAGCATCTCTAGTGGTGGAATTTCCATTGTTTCAGAGTAA 2412 46.52 MTTLSSPPLALAVLTLIAVVFPLFPAIQALGSASTLAVSYGSRTVCGIVAEQPTQRILCFRDGQTIFIEPHVSFSAVSGGRNIFCGIRSGGYTLLCWGFNSTNAAFTRRRLYYNPNVLLENLAVGDDQICATVVGAGNVTCWRDGNNARGEFSSVQYDSISSGYGFSCGILKGNQSVRCWGRNSSIATEIEDGFRNISMLSIVAGGFHVCGLNISGGLVCKGNNDFGQLDFPSNSSVEFSELALGERHSCGILVSNRSVICWGGLGFSIDSIRETSFELISSGSDFVCGLTTSNFSVLCWGPGWSNNSSSPSSLSLPKILPGPCVLLSSCSCGVYPLSQTLCSNSGNVCNRCLFTVPTPSSPEPLPSSPPQSPPGTTPSSPPAALRKGLLAFGIVGSVGAFAGICTIIYCLWTGVCFGNKKIHNSVQPTITRAASSNGGTTTSNTNNSPPSRSSTIRRQGSRIMRRQRSGTSSKHADRAEEFTLAELAMATNDFSPENKIGEGSFGVVYRGKLYDGREVAIKRGETGQKTKKFQEKESAFDSELAFLSRLHHKHLVRLVGYCEEKDERLLVYEYMKNGALYNHLHDKNNIEKASSVVNSWKMRIKIALDAARGIEYLHNYAVPPIIHRDIKSSNILLDANWTARVSDFGLSLMSPGSDRDYRPTKAAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAIFKDEEQGGTPVSVVDYAVPVIMAGELEKILDQRVGPPQINEAEAVELVAYTAMHCVHLEGKDRPTMTDIVANLERALNLCDDSHGSISSGGISIVSE 803
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 9496239 9498660 - MELO3C025195.2.1 Cme10g01081 339967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g01081 803 Gene3D Transferase(Phosphotransferase) domain 1 575 792 - -
Cme10g01081 803 ProSitePatterns Protein kinases ATP-binding region signature. 500 522 IPR017441 GO:0005524
Cme10g01081 803 Gene3D - 63 319 IPR009091 -
Cme10g01081 803 MobiDBLite consensus disorder prediction 432 477 - -
Cme10g01081 803 SMART serkin_6 494 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme10g01081 803 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 9 799 IPR044815 GO:0004674
Cme10g01081 803 SUPERFAMILY Protein kinase-like (PK-like) 475 779 IPR011009 -
Cme10g01081 803 MobiDBLite consensus disorder prediction 360 382 - -
Cme10g01081 803 Pfam Regulator of chromosome condensation (RCC1) repeat 159 184 - -
Cme10g01081 803 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Cme10g01081 803 ProSiteProfiles Protein kinase domain profile. 494 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme10g01081 803 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 9 799 - -
Cme10g01081 803 SUPERFAMILY RCC1/BLIP-II 65 263 IPR009091 -
Cme10g01081 803 MobiDBLite consensus disorder prediction 360 380 - -
Cme10g01081 803 Gene3D Phosphorylase Kinase; domain 1 455 574 - -
Cme10g01081 803 Pfam Protein kinase domain 496 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme10g01081 803 MobiDBLite consensus disorder prediction 432 458 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g00938 Cme-Chr3:17910950 Cme10g01081 Cme-Chr10:9496239 1.02E-142 dispersed
Cme10g01081 Cme-Chr10:9496239 Cme12g00076 Cme-Chr12:764008 0 dispersed
Cme10g01081 Cme-Chr10:9496239 Cme04g02800 Cme-Chr4:33066024 1.19E-65 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65209 PF00069 Pkinase 1.70E-45 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g01081 - - csv:101215625 1393.64