Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g01189 ATGGCAGCTGAAGATCTTTCAGAAGCAAGAGCAGCCCTCAACCTCCTCCGCAGTAGACTCTGCAACTCTAGTTTCTATTCCAAACCTCCATCGAATTCTTCTGATAGCAATTACAGTAAATTGAAGTTCATAATATCCAGTTCGGTTACTGAAGCGTGTAATAATTCAATCCTGCTTCTCGGCCCCCGGGGTTCGGGGAAAATGGCGGTGCTGGAACTTGTTCTACAAGATCTATTACTAGAATATCCGGATATGATTACCGTGATAAGGTTGAGTGGTCTTCTGCATTGTGACGATAATGGTGCCTTCAAGGAGATTGCTAGGCAGCTTTGCTCAGAGTATCAATTATTATTCTCAAAAATGGCATCATTCGATGACAATTCCAAGTTTATGATAGCTATGCTACGGGAGTGTGGCTTGGCACATAAGACAATTGTTTTTGTACTCGATGAATTTGATCTTTTTGCACAAGGAAAACAACGGTTACTTTATAGTTTGTTAGATGCCATGCAATCAGTATCATCACAAGCTATTGTTATTGGCATCAGTTGTCGATTGGATGCTGATCAGCTACTCGAGAAAAGAGTAAGATCTCGGTTCTCCCATAGAAAGCTGTTATTTCTTCCTCCCTGCAAGGAAGATGTTGAGAGATTGCTGGAGGACATTTTATCATTGCCAATAGACTCAGACCTTCCTCACGACTACATTATCAAATTTAATGCAAAGCTTCATAACATGTTAGCAAATGAGAGATTTAAAAAGATCATTAACACTTATTTGGACTCTGATTCGACCGTCAAACAATTTGTGAGATATCTGTTTTGTGCCATATCAAAGATGGACTTGAAATCTGGGTTGCTGACCGTTGAGAATTTTGAACATGCTCTTTCCGATATTCAAAGGCAGCCAAAGCAGGAATATATAAAAGATTGTTCCATATTGGAGCTCTATATTCTGGTATGTATGAAAAGGTTGGAAGTTAAGGAGCAGAATTCGTATAACTTCAATTCTGTAATGAAAGAGTACAAGAGTATACATGATTCATTCCGGACATCTGATTATTATTCACGAAGTGTATGCTTACGGGCTTTTGAGCACCTTCTACAGCGTGAATTAATCTGTTTTGCTGACAACCGTGGACATACTCAATCAATTGAATTTCGACCAGCCAAGCTGTTAATAACATCTCATGAACTACATCATGGACTAAAGGCATATCGTTCATGTCCTGTCATCCTTCAGAAATTAATGAATTGA 1257 39.06 MAAEDLSEARAALNLLRSRLCNSSFYSKPPSNSSDSNYSKLKFIISSSVTEACNNSILLLGPRGSGKMAVLELVLQDLLLEYPDMITVIRLSGLLHCDDNGAFKEIARQLCSEYQLLFSKMASFDDNSKFMIAMLRECGLAHKTIVFVLDEFDLFAQGKQRLLYSLLDAMQSVSSQAIVIGISCRLDADQLLEKRVRSRFSHRKLLFLPPCKEDVERLLEDILSLPIDSDLPHDYIIKFNAKLHNMLANERFKKIINTYLDSDSTVKQFVRYLFCAISKMDLKSGLLTVENFEHALSDIQRQPKQEYIKDCSILELYILVCMKRLEVKEQNSYNFNSVMKEYKSIHDSFRTSDYYSRSVCLRAFEHLLQRELICFADNRGHTQSIEFRPAKLLITSHELHHGLKAYRSCPVILQKLMN 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12057748 12063920 + MELO3C034164.2.1 Cme10g01189 340075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g01189 418 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 4 9 417 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Cme10g01189 418 Pfam Origin recognition complex (ORC) subunit 4 C-terminus 219 401 IPR032705 -
Cme10g01189 418 PIRSF ORC4 2 418 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Cme10g01189 418 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 227 IPR027417 -
Cme10g01189 418 Pfam AAA ATPase domain 39 174 IPR041664 -
Cme10g01189 418 Gene3D - 34 209 IPR027417 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g01189 K02606 - csv:101220845 763.066