Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g01233 ATGGATCTTGAGCATGGGAAGTGTTGGGATAGTTCAAAGAAGGATTCTTGGAAAACGGTTCTTGTATTGGCCTATCAAAGCCTTGGTGTTGTTTATGGCGATTTGAGCATCTCTCCTCTTTACGTTTATAGAAGCACTTTTGCTGAAGACATCCAACATTCAGATACTAACGAAGAAATTTATGGTGTTCTTTCATTTGTCTTCTGGACTCTCACTTTAGTCCCACTTTTCAAATACGTTTTTGTAGTTCTTAGAGCTGATGACAATGGTGAAGGTGGAACTTTTGCTCTGTACTCTTTAATTTGTAGACATGCCAAAGTAAGCCTTCTCCCCAATAGACAAGTTGCTGATGAAGCTCTTTCAACTTACTTGCTGGAACATCCACCAGAGAAGAAGAAGCATTCTAAGGTTAAATTGCTACTAGAGAAGCACAGGGCTCTTCACACTGCCTTGTTGATTCTTGTTCTTCTAGGGACTTGTATGGTGATTGGAGATGGTCTGCTCACTCCTGCCATCTCTGTTTTCTCAGCAGTTTCTGGACTTGAGTTATCCATGACCAAGGCTCACCATCAGTACGCGGTGGTTCCAATCACTTGCTTTATCTTGGTTTGTCTATTTGCACTTCAACACTACGGCACACATCGAGTCGGCTTTGTATTTGCCCCCATTGTATTGGCATGGCTACTCTGCATCAGTACCCTTGGCATATACAATATTATACACTGGAATCCACATGTTTATGAGGCTCTTTCTCCATATTACATGTTCAAGTTTTTGGAGAAGACAAGGAAGAGCGGTTGGATGTCATTGGGGGGTATATTGCTATGCATAACAGGCTCAGAAGCGATGTTTGCTGATCTTGGTCACTTCTCATACACTGCAATACAGATTGCTTTCACATTTTTGGTGTATCCAGCGCTTATATTGGCATACATGGGCCAAGCTGCTTACTTATCACAACATCACCATACCACCAAAAGCATTGGCTTCTACGTTTCTGTTCCAGAGAGTGTGAGATGGCCAGTGCTTACAATTGCTATACTTGCGTCGGTTGTCGGAAGCCAAGCAATCATTAGTGGAACATTCTCCATTATTAACCAGAGCCAATCCCTTGGGTGCTTCCCACGAGTGAAGGTTGTTCATACCTCTGACAAGATCCATGGCCAGATCTACATTCCAGAGATAAATTGGATTCTTATGATTCTCTGCGTAGCCGTTACGATTGGATTTAGAGACATAAAACACCTTGGAAATGCATCAGGTCTGGCTGTAATGACTGTGATGCTTGTAACAACATGTCTTACATCTTTGGTGATCGTCCTTTGTTGGAACAAATCTCCACTTTTGGCTCTCTCCTTTTTGATCTTCTTTGGGTCTGTTGAATTGCTCTATTTCTCAGCTTCACTCACCAAGTTCAGAGAAGGTGCTTGGCTCCCCATTCTTTTAGCTCTCTTCCTCATGACCATCATGTTTGTTTGGCACTATGCAACCATCAAGAAGTATGAATTTGATCTTCACAACAAGGTTTCATTAGAATGGTTACTAGCATTGGGGCCAAGCCTTGGGATTGCTCGTGTACCTGGCATAGGATTAGTCTTCACCGATCTCACCTCAGGCATCCCTGCCAACTTCTCCCGGTTTGTTACCAACCTCCCTGCATTTCATCGGATTCTCGTCTTTGTATGTATCAAGTCAGTACCAGTTCCTTTCGTACCTCCTGCTGAGCGATATCTTGTGGGAAGAGTTGGCCCAGCTACGCACCGGTCATACAGGTGCATTGTTCGGTATGGCTACCGTGATGTTCATCAGGATGTGGACTCATTTGAGTCTGAATTAATCAAGAAACTTGCGGACTTCATCCGCTACGATTGGTTCAGAAAGCAAAGAGGCAACTCTTGCAGTGAGGACGATGCATCCCGTTCAAATGAATCGACAAGTGAATGCAGGCTGGCTGTGATTGGAACCATAGCGTTTGCAGGTGCAACTGCTTATGAAGAGACCGTGCAGCCTGCAAGCGTATCAGTCGGCTTCCAAACTGTAGACAGCATCGCTGATGTGATCGAAATGGAGCCATTGGGAGAAGAAAGAAGAGTCAGATTTGCCATAGATGATGAATTTGAGGGTGGCTCACAAGCTGAAACAGAAGTCCTTCTGCAAGAAGAGCTAGAAGATCTTCTAGCAGCGCAGCAATCCGGGACAGCATTCATTCTCGGGCATTCACACGTCCGTGTGAAGCAAGGATCGTCTCTGTTGAAGAGGCTGGCCATTAACTATGGCTACAACTTCCTGAGAAGGAATTGTAGGGGAGCAGATGTTGCTCTTAAGGTGCCACCAGTGTCTCTTCTTGAAGTTGGCATGGTTTATGTTGTATAA 2373 44.33 MDLEHGKCWDSSKKDSWKTVLVLAYQSLGVVYGDLSISPLYVYRSTFAEDIQHSDTNEEIYGVLSFVFWTLTLVPLFKYVFVVLRADDNGEGGTFALYSLICRHAKVSLLPNRQVADEALSTYLLEHPPEKKKHSKVKLLLEKHRALHTALLILVLLGTCMVIGDGLLTPAISVFSAVSGLELSMTKAHHQYAVVPITCFILVCLFALQHYGTHRVGFVFAPIVLAWLLCISTLGIYNIIHWNPHVYEALSPYYMFKFLEKTRKSGWMSLGGILLCITGSEAMFADLGHFSYTAIQIAFTFLVYPALILAYMGQAAYLSQHHHTTKSIGFYVSVPESVRWPVLTIAILASVVGSQAIISGTFSIINQSQSLGCFPRVKVVHTSDKIHGQIYIPEINWILMILCVAVTIGFRDIKHLGNASGLAVMTVMLVTTCLTSLVIVLCWNKSPLLALSFLIFFGSVELLYFSASLTKFREGAWLPILLALFLMTIMFVWHYATIKKYEFDLHNKVSLEWLLALGPSLGIARVPGIGLVFTDLTSGIPANFSRFVTNLPAFHRILVFVCIKSVPVPFVPPAERYLVGRVGPATHRSYRCIVRYGYRDVHQDVDSFESELIKKLADFIRYDWFRKQRGNSCSEDDASRSNESTSECRLAVIGTIAFAGATAYEETVQPASVSVGFQTVDSIADVIEMEPLGEERRVRFAIDDEFEGGSQAETEVLLQEELEDLLAAQQSGTAFILGHSHVRVKQGSSLLKRLAINYGYNFLRRNCRGADVALKVPPVSLLEVGMVYVV 790
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12843721 12850253 - MELO3C020132.2.1 Cme10g01233 340119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g01233 790 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 790 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cme10g01233 790 Pfam K+ potassium transporter 25 600 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cme10g01233 790 PANTHER POTASSIUM TRANSPORTER 2 1 790 - -
Cme10g01233 790 TIGRFAM kup: potassium uptake protein 23 789 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme10g00509 Cme-Chr10:3288116 Cme10g01233 Cme-Chr10:12843721 0 dispersed
Cme10g01233 Cme-Chr10:12843721 Cme12g01537 Cme-Chr12:22839730 0 dispersed
Cme10g01233 Cme-Chr10:12843721 Cme04g01908 Cme-Chr4:26778147 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g01233 K03549 - csv:101211022 1508.43