Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g01281 ATGGCCATAACCTTCATTGCTATCATTTTATTCATATTTTCCATTCTTTATGCTATAAAATTTTCTCAATATTATCACAATGGAACTCCCTCAATTCGACGGCTTCCTCCTGGCCCAAAGCCATGGCCTCTCATTGGTTGCCTTCCAGCAATGTTGAGAAACAAAAACTTGCCAACATACCAATGGATCCATGAAGTTATGAAGCAATTCAACACTGAAATTGCATGTATCCGTCTTGGATCAAATACCCACATAATTCCTGTGGCTTCTCCAGAACTCTCTCTTGAATTTCTAAACACACACGATTCTGTGTTCGGATCACGATCCATCTCCATGACTGCTGAGATAGTGAGCAATGGATATCTAAGTACAGTTCTTTCACCAATGGGAGAGCAGTGGAAGAAAATGAGAAAAATACTCGTTTCACAAGTACTCAATCCTCCAACCCTCCATCAAATGGTTGGCCAAAGAACAGATGAAGCCGATATTCTTCTACGTTACATTTTCGGCCTCACTAGAAACGGTGAAGCGATCAACATAAGAAGCATTGTACGGCATTATTGTGGTACCGTTATTAGAAGAATGATTTTTAGTAGAAGATACTATGGAAAAGGTAGGGAAGACGGAGGGCCATCTTTAGAAGAAGAAGATCACAATCAAGCACTGCTGTCCATTCTTAGGCATGTTAATGCTTTTTCTATATCTGAGTTTATACCTCTGTTGAAGAAATTTGATCTAGATGGACATGAAAAGATAGTAAAAAGGGCTTTGAAAGTTATAAGAAATAATGATGAACCCATTATAGAGGAAAGAGTGCAAGACTGGAGAGATGGAAAGAAAAAGAAGGCCGAGGACATTCTTGATATCCTTATCTCACTCAAAAATGAGAATGGCAAATCGTTGTTGTCCATCGAAGAGATTAAGGCTCAAGTCACGGATTTGCAACTTGCCAGCATAGATAATCCTTCAAATGCAGTAGAATGGGCACTTGCAGAATTACTTAATCAACCAAAAATTATCCAAAAAGCTGTTGAAGAGTTGGATAAAGTAATTGGAAGAGATAGACTAGTACAAGAATGTGATATACCTAACCTCATGTATCTCACGGCTTGTATTAGAGAATCTTTTCGACTTCATCCATTTTCACCCTTCAATGTTCCTCATGTTTCCAATTCTGACGTTTTTGTGGCTGGCTACTTCATCCCTAGAGGTAGCCAAGTATTACTAAGTCGTTTGGGTCTCGGTCGAAACCCTAGAATATGGGAGGATCCAATGAGGTTTGATCCAGAACGTCATCTGAAAGATGGGACAATTAAATTTGGAATTTCAGAACCGAGTCTTCGGTTCATCACTTTCACAAGAGGGAGAAGAGGATGCATTGGTACCTCACTTGGCACAAATATTACCATGATGCTATTTGCTAGACTTCTACAAGGATTTTCATGGAGCTTACCGCCAGAAACTCCAGAGATAAATTATTATTCTAGAACCGATGAACTTTCTCTTCCAAAGCCATTACATCTACATGCAGTGCCACGTTTATCCCATGTTATGTATTATTGA 1563 39.16 MAITFIAIILFIFSILYAIKFSQYYHNGTPSIRRLPPGPKPWPLIGCLPAMLRNKNLPTYQWIHEVMKQFNTEIACIRLGSNTHIIPVASPELSLEFLNTHDSVFGSRSISMTAEIVSNGYLSTVLSPMGEQWKKMRKILVSQVLNPPTLHQMVGQRTDEADILLRYIFGLTRNGEAINIRSIVRHYCGTVIRRMIFSRRYYGKGREDGGPSLEEEDHNQALLSILRHVNAFSISEFIPLLKKFDLDGHEKIVKRALKVIRNNDEPIIEERVQDWRDGKKKKAEDILDILISLKNENGKSLLSIEEIKAQVTDLQLASIDNPSNAVEWALAELLNQPKIIQKAVEELDKVIGRDRLVQECDIPNLMYLTACIRESFRLHPFSPFNVPHVSNSDVFVAGYFIPRGSQVLLSRLGLGRNPRIWEDPMRFDPERHLKDGTIKFGISEPSLRFITFTRGRRGCIGTSLGTNITMMLFARLLQGFSWSLPPETPEINYYSRTDELSLPKPLHLHAVPRLSHVMYY 520
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 13741188 13743336 - MELO3C020180.2.1 Cme10g01281 340167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g01281 520 Pfam Cytochrome P450 36 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g01281 520 SUPERFAMILY Cytochrome P450 36 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g01281 520 Gene3D Cytochrome P450 31 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g01281 520 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g01281 520 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g01281 520 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g01281 520 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g01281 520 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g01281 520 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g01281 520 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g01281 520 PANTHER PHENYLALANINE N-MONOOXYGENASE 8 518 - -
Cme10g01281 520 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 8 518 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g00602 Cme-Chr2:6772122 Cme10g01281 Cme-Chr10:13741188 0 dispersed
Cme02g00603 Cme-Chr2:6786138 Cme10g01281 Cme-Chr10:13741188 0 dispersed
Cme02g00820 Cme-Chr2:10595124 Cme10g01281 Cme-Chr10:13741188 0 dispersed
Cme10g01281 Cme-Chr10:13741188 Cme06g00092 Cme-Chr6:591087 5.88E-79 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g01281 - K12153 csv:101216819 964.14