Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g01287 ATATGTTTGTTTTGGGAAATTCTACATCGAATTACAGAACCCTACTCCATTTCCGAACTTCATCGCATCTCACTGCCTCTCGGTTTCTGCGACTACGCTCCCCCATCCAGCTCTCTACTTCTTCAATTCAATCTTCAACATCTGAATTTTGGGCGTGGAGCATTTCTCCCTTCAGCCATGGTTTTGGTCTTACACGCAGGAAAGACGAATAAAAATTCTTTCAAGGCTCTCATTGCTGCAGAATACAATGGAGTCGAAGTGAAAGTGGTCCCAGACTTTGAGATGGGAGTCTCAAACAAGACTCCGGAGTTTATCAAGATGAACCCTATTGGGAAGGTTCCTGTTTTAGAAACGCCCAACGGACCCATATTCGAGAGTAATGCCATAGCCCGTTATGTTGCACGTTTGAAGGCTGATAGTCCTCTGTATGGTTCATTTCTGATAGATTATGGGCATATTGAACAATGGATTGAGTTTGCATCATTGGAGGTAGATTCTAATATTCTGACTTGGTTTAGACCTAGAATGGGGAGAGCTGCTTATCTTCCTCCTGTTGAGGAAGCTGCAATTGCTGCATTGAAGAGAGCTTTGGGAGCTTTGAATACACACCTGGCTTCAAATACATACCTAGTTGGTCATTCTATTACATTAGCTGATATAGTAATGACTTGCAACCTATTATTGGGTTTTACTAAGCTCATGACTAAGAACTTTACCTCGGAGTTCCCACATGTTGAGCGGTACTTCTGGACATTGGTCAATCAACCAAACTTCAAAAAAGTCCTTGGTGAGGTGAAGCAGGCAGAGTCAGTTCTTCCTGTTCAATCTGCCAAAAAACCTGATGATTCTTCTAAGCCAAAGGACTCAAATGAGAGTAAGAAAGAACCGAAAAAGGAAGCTGAAAAAGAGAAGCCAAGGGATGTAGCTGGCGAGGGAGAAGATGAGGCACCAAAGCCAAAACCCAAAAATCCTCTTGATTTGCTACCTCCCAGTAAGATGATTCTGGATGAGTGGAAGCGGCTATACTCGAATACCAAAACCAACTTTCGGGAGGTTGCAATTAAAGGATTTTGGGACATGTACGATCCAGAGGGATATTCTCTTTGGTTCTGTGATTACAAGTACAACGATGAGAACATTGTTTCATTCGTGACGTTGAACAAGGTTGGTGGCTTTCTCCAGCGGATGGATCTCGCTCGTAAGTATGCTTTTGGGAAGATGTTAGTGATTGGATCAGAACCTCCATTTAAGGTGAAGGGCTTATGGCTTTTCCGTGGACAAGAGATCCCGAAATTCATCTTGGACGAGTGCTATGACATGGAACTTTATGAATGGAGGAAGGTTGATATATCGGATGAAGTACAGAAGGAATGCGTAAACCAGATGATTGAAGATCAGGAGCCTTTTGAAGGGGAGGCTTTGTTGGATGCCAAATGCTTTAAGTGA 1446 42.95 ICLFWEILHRITEPYSISELHRISLPLGFCDYAPPSSSLLLQFNLQHLNFGRGAFLPSAMVLVLHAGKTNKNSFKALIAAEYNGVEVKVVPDFEMGVSNKTPEFIKMNPIGKVPVLETPNGPIFESNAIARYVARLKADSPLYGSFLIDYGHIEQWIEFASLEVDSNILTWFRPRMGRAAYLPPVEEAAIAALKRALGALNTHLASNTYLVGHSITLADIVMTCNLLLGFTKLMTKNFTSEFPHVERYFWTLVNQPNFKKVLGEVKQAESVLPVQSAKKPDDSSKPKDSNESKKEPKKEAEKEKPRDVAGEGEDEAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENIVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIPKFILDECYDMELYEWRKVDISDEVQKECVNQMIEDQEPFEGEALLDAKCFK 481
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 13854391 13857101 - MELO3C020183.2.1 Cme10g01287 340173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g01287 481 CDD GST_C_EF1Bgamma_like 149 269 - -
Cme10g01287 481 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 60 141 IPR004045 -
Cme10g01287 481 SUPERFAMILY GST C-terminal domain-like 132 273 IPR036282 -
Cme10g01287 481 SUPERFAMILY eEF1-gamma domain 321 481 IPR036433 GO:0003746|GO:0006414
Cme10g01287 481 SUPERFAMILY Thioredoxin-like 58 144 IPR036249 -
Cme10g01287 481 Pfam Glutathione S-transferase, N-terminal domain 67 135 IPR004045 -
Cme10g01287 481 PANTHER - 60 481 - -
Cme10g01287 481 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 146 274 IPR010987 -
Cme10g01287 481 SMART EF1G_2 320 428 IPR001662 GO:0003746|GO:0006414
Cme10g01287 481 Gene3D - 139 276 - -
Cme10g01287 481 Gene3D Glutaredoxin 59 133 - -
Cme10g01287 481 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 321 481 IPR036433 GO:0003746|GO:0006414
Cme10g01287 481 Pfam Glutathione S-transferase, C-terminal domain 187 256 IPR004046 -
Cme10g01287 481 SFLD Glutathione Transferase (cytosolic) 63 249 IPR040079 -
Cme10g01287 481 MobiDBLite consensus disorder prediction 280 321 - -
Cme10g01287 481 CDD GST_N_EF1Bgamma 62 136 - -
Cme10g01287 481 Pfam Elongation factor 1 gamma, conserved domain 320 428 IPR001662 GO:0003746|GO:0006414
Cme10g01287 481 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 321 481 IPR001662 GO:0003746|GO:0006414
Cme10g01287 481 MobiDBLite consensus disorder prediction 272 328 - -
Cme10g01287 481 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 60 481 IPR044628 GO:0004364
Cme10g01287 481 SFLD Main (cytGST) 63 249 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g02162 Cme-Chr6:27490900 Cme10g01287 Cme-Chr10:13854391 0 dispersed
Cme06g02163 Cme-Chr6:27494649 Cme10g01287 Cme-Chr10:13854391 1.37E-52 dispersed
Cme10g01287 Cme-Chr10:13854391 Cme01g02339 Cme-Chr1:31744298 5.11E-08 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g01287 K03233 - zju:107412556 705.286