Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme10g01287 | ATATGTTTGTTTTGGGAAATTCTACATCGAATTACAGAACCCTACTCCATTTCCGAACTTCATCGCATCTCACTGCCTCTCGGTTTCTGCGACTACGCTCCCCCATCCAGCTCTCTACTTCTTCAATTCAATCTTCAACATCTGAATTTTGGGCGTGGAGCATTTCTCCCTTCAGCCATGGTTTTGGTCTTACACGCAGGAAAGACGAATAAAAATTCTTTCAAGGCTCTCATTGCTGCAGAATACAATGGAGTCGAAGTGAAAGTGGTCCCAGACTTTGAGATGGGAGTCTCAAACAAGACTCCGGAGTTTATCAAGATGAACCCTATTGGGAAGGTTCCTGTTTTAGAAACGCCCAACGGACCCATATTCGAGAGTAATGCCATAGCCCGTTATGTTGCACGTTTGAAGGCTGATAGTCCTCTGTATGGTTCATTTCTGATAGATTATGGGCATATTGAACAATGGATTGAGTTTGCATCATTGGAGGTAGATTCTAATATTCTGACTTGGTTTAGACCTAGAATGGGGAGAGCTGCTTATCTTCCTCCTGTTGAGGAAGCTGCAATTGCTGCATTGAAGAGAGCTTTGGGAGCTTTGAATACACACCTGGCTTCAAATACATACCTAGTTGGTCATTCTATTACATTAGCTGATATAGTAATGACTTGCAACCTATTATTGGGTTTTACTAAGCTCATGACTAAGAACTTTACCTCGGAGTTCCCACATGTTGAGCGGTACTTCTGGACATTGGTCAATCAACCAAACTTCAAAAAAGTCCTTGGTGAGGTGAAGCAGGCAGAGTCAGTTCTTCCTGTTCAATCTGCCAAAAAACCTGATGATTCTTCTAAGCCAAAGGACTCAAATGAGAGTAAGAAAGAACCGAAAAAGGAAGCTGAAAAAGAGAAGCCAAGGGATGTAGCTGGCGAGGGAGAAGATGAGGCACCAAAGCCAAAACCCAAAAATCCTCTTGATTTGCTACCTCCCAGTAAGATGATTCTGGATGAGTGGAAGCGGCTATACTCGAATACCAAAACCAACTTTCGGGAGGTTGCAATTAAAGGATTTTGGGACATGTACGATCCAGAGGGATATTCTCTTTGGTTCTGTGATTACAAGTACAACGATGAGAACATTGTTTCATTCGTGACGTTGAACAAGGTTGGTGGCTTTCTCCAGCGGATGGATCTCGCTCGTAAGTATGCTTTTGGGAAGATGTTAGTGATTGGATCAGAACCTCCATTTAAGGTGAAGGGCTTATGGCTTTTCCGTGGACAAGAGATCCCGAAATTCATCTTGGACGAGTGCTATGACATGGAACTTTATGAATGGAGGAAGGTTGATATATCGGATGAAGTACAGAAGGAATGCGTAAACCAGATGATTGAAGATCAGGAGCCTTTTGAAGGGGAGGCTTTGTTGGATGCCAAATGCTTTAAGTGA | 1446 | 42.95 | ICLFWEILHRITEPYSISELHRISLPLGFCDYAPPSSSLLLQFNLQHLNFGRGAFLPSAMVLVLHAGKTNKNSFKALIAAEYNGVEVKVVPDFEMGVSNKTPEFIKMNPIGKVPVLETPNGPIFESNAIARYVARLKADSPLYGSFLIDYGHIEQWIEFASLEVDSNILTWFRPRMGRAAYLPPVEEAAIAALKRALGALNTHLASNTYLVGHSITLADIVMTCNLLLGFTKLMTKNFTSEFPHVERYFWTLVNQPNFKKVLGEVKQAESVLPVQSAKKPDDSSKPKDSNESKKEPKKEAEKEKPRDVAGEGEDEAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENIVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIPKFILDECYDMELYEWRKVDISDEVQKECVNQMIEDQEPFEGEALLDAKCFK | 481 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 13854391 | 13857101 | - | MELO3C020183.2.1 | Cme10g01287 | 340173 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme10g01287 | 481 | CDD | GST_C_EF1Bgamma_like | 149 | 269 | - | - | |
Cme10g01287 | 481 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 60 | 141 | IPR004045 | - | |
Cme10g01287 | 481 | SUPERFAMILY | GST C-terminal domain-like | 132 | 273 | IPR036282 | - | |
Cme10g01287 | 481 | SUPERFAMILY | eEF1-gamma domain | 321 | 481 | IPR036433 | GO:0003746|GO:0006414 | |
Cme10g01287 | 481 | SUPERFAMILY | Thioredoxin-like | 58 | 144 | IPR036249 | - | |
Cme10g01287 | 481 | Pfam | Glutathione S-transferase, N-terminal domain | 67 | 135 | IPR004045 | - | |
Cme10g01287 | 481 | PANTHER | - | 60 | 481 | - | - | |
Cme10g01287 | 481 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 146 | 274 | IPR010987 | - | |
Cme10g01287 | 481 | SMART | EF1G_2 | 320 | 428 | IPR001662 | GO:0003746|GO:0006414 | |
Cme10g01287 | 481 | Gene3D | - | 139 | 276 | - | - | |
Cme10g01287 | 481 | Gene3D | Glutaredoxin | 59 | 133 | - | - | |
Cme10g01287 | 481 | Gene3D | Translation elongation factor EF1B, gamma chain, conserved domain | 321 | 481 | IPR036433 | GO:0003746|GO:0006414 | |
Cme10g01287 | 481 | Pfam | Glutathione S-transferase, C-terminal domain | 187 | 256 | IPR004046 | - | |
Cme10g01287 | 481 | SFLD | Glutathione Transferase (cytosolic) | 63 | 249 | IPR040079 | - | |
Cme10g01287 | 481 | MobiDBLite | consensus disorder prediction | 280 | 321 | - | - | |
Cme10g01287 | 481 | CDD | GST_N_EF1Bgamma | 62 | 136 | - | - | |
Cme10g01287 | 481 | Pfam | Elongation factor 1 gamma, conserved domain | 320 | 428 | IPR001662 | GO:0003746|GO:0006414 | |
Cme10g01287 | 481 | ProSiteProfiles | Elongation factor 1 (EF-1) gamma C-terminal domain profile. | 321 | 481 | IPR001662 | GO:0003746|GO:0006414 | |
Cme10g01287 | 481 | MobiDBLite | consensus disorder prediction | 272 | 328 | - | - | |
Cme10g01287 | 481 | PANTHER | ELONGATION FACTOR 1-GAMMA 1-RELATED | 60 | 481 | IPR044628 | GO:0004364 | |
Cme10g01287 | 481 | SFLD | Main (cytGST) | 63 | 249 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme06g02162 | Cme-Chr6:27490900 | Cme10g01287 | Cme-Chr10:13854391 | 0 | dispersed | |
Cme06g02163 | Cme-Chr6:27494649 | Cme10g01287 | Cme-Chr10:13854391 | 1.37E-52 | dispersed | |
Cme10g01287 | Cme-Chr10:13854391 | Cme01g02339 | Cme-Chr1:31744298 | 5.11E-08 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme10g01287 | K03233 | - | zju:107412556 | 705.286 |