Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g01292 ATGGAGGGGTATGTAATTAGTGGTTTTGTGTTGGTTTTCCCAACCGCGGTTGTGATGGCAGTGGTGATGATATTGCTCCATTTTTACTTCTACGGTGCGTGGAGGAGGACGGCGGACGTGAGAAGGAAGTTGAGAGCACAAGGCGTGACTGGACCGCCACCGTCCATTTTATATGGTAACTTGCCGGAGATGCAAAAGATCCAGTTGCAAACGGCTGCTATGGCTTCTCCATTGCATTGTGCTTCGGCGATTGTTGCTCATGATTATACATCTACTCTCTTTCCCTATTTCGTCGAGTGGAGGAAGCAATATGGGCCATTATACACATACTCGACAGGGACAAGACAGCATCTTTACGCCAACAAGGTTGAACTTGTTAAGGACTTGAGCCTCTCCAACAATCTCAACGTGGGGAAGCCTTTCTATGTCACCAGAAAGCTTGCTCCAATTCTTGGCCAAAGCGTCGTCCGCTCCAACGGCTCTGTTTGGGCAGTGCAACGTAAGGTCATTGCCCCCGAGTTCTTCATGGACCGTGTCCGGGCCATGGGGTTCCACATGGTCGATGCGGCATCGTGTCTGATCAACAAATGGGAAAGGAGGGTTGGAGACGGAACCGTCGAGATTGATGTCGATGAAGATCTAAGAGGGTTCTCGGCCGATGTCATTTCTAGAGCTTGCTTTGGGAGCTCATATGAGAAGGGGAAAGAGATTTTTTCCAAGCTTAGAGATCTCCAGAAGTTGATTTCTGAGGATAGCTTTCTGTTTGGTTACAGTTCATGGAGTGATAGATTTTTGCGACCACGAAAACACAAAAGCATAAAAAGGTTGGAGAAGGAGATTGAGTCAATAATATGGGAGACAGTTCAACAACGACAAAAAGAATGCTCTAAAACCTCCTCGTCGGACAAGGATTTGTTGCAGCTAATAATGGAAGCCACCATCAATGACCCAAATATTGGAGCCAAGGACTCTTCCAAGAACTTCATTGTTGACAACTGCAAGAGCATCTACTTCGCCGGCCATGAGTCCACTGCCGTGGCCGCCACTTGGTCCTTGATGCTCCTCGCTCTCCACCCCGAATGGCAAGACCGTATCCGCTCTGAGTTTGCTCAGGCTTGTCCTGACGGCCACCTTGACACGACTGCAACTTTACAACTCAAATCGGTGAATATGGTGATTCATGAAACGTTACGATTGTACCCACCAGCTGCATTTGTGGCGAGGGAGACGTTTGCTGAGACACAACTCGGGAATGTGGTGGTTCCAAAGGGCGTTTGCTTATGGACTTTAATTCCGATGCTGCACAGAGAAGTCGAAATATGGGGAGAAGATGCCAATAAGTTCAAGCCAGAGCGGTTTGCAAATGGCGTAGCTAAAGCGTGCAAGTTCCCTCAGGCCTACGTGCCATTTGGGGCAGGCCCTAGACTATGTTTAGGGAAGAACTTCGCATTAGTTGAATTGAAGATCATAATTTCTCTTATAGTTTCCAAGTTTAGATTCTCATTGTCTCCAGAGTATCACCATTGCCCTTCATATAGAATGGTTGTGGAGCCTGCAAATGGTGTGAAGATTGTTTTCCAAAGGCTTTGA 1590 47.48 MEGYVISGFVLVFPTAVVMAVVMILLHFYFYGAWRRTADVRRKLRAQGVTGPPPSILYGNLPEMQKIQLQTAAMASPLHCASAIVAHDYTSTLFPYFVEWRKQYGPLYTYSTGTRQHLYANKVELVKDLSLSNNLNVGKPFYVTRKLAPILGQSVVRSNGSVWAVQRKVIAPEFFMDRVRAMGFHMVDAASCLINKWERRVGDGTVEIDVDEDLRGFSADVISRACFGSSYEKGKEIFSKLRDLQKLISEDSFLFGYSSWSDRFLRPRKHKSIKRLEKEIESIIWETVQQRQKECSKTSSSDKDLLQLIMEATINDPNIGAKDSSKNFIVDNCKSIYFAGHESTAVAATWSLMLLALHPEWQDRIRSEFAQACPDGHLDTTATLQLKSVNMVIHETLRLYPPAAFVARETFAETQLGNVVVPKGVCLWTLIPMLHREVEIWGEDANKFKPERFANGVAKACKFPQAYVPFGAGPRLCLGKNFALVELKIIISLIVSKFRFSLSPEYHHCPSYRMVVEPANGVKIVFQRL 529
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 13976239 13981662 - MELO3C026824.2.1 Cme10g01292 340178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g01292 529 PANTHER CYTOCHROME P450 714A1-RELATED 17 524 - -
Cme10g01292 529 SUPERFAMILY Cytochrome P450 88 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g01292 529 PRINTS P450 superfamily signature 339 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g01292 529 PRINTS P450 superfamily signature 391 402 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g01292 529 PRINTS P450 superfamily signature 468 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g01292 529 PRINTS P450 superfamily signature 477 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g01292 529 Gene3D Cytochrome P450 34 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g01292 529 PRINTS E-class P450 group I signature 101 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g01292 529 PRINTS E-class P450 group I signature 217 235 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g01292 529 PRINTS E-class P450 group I signature 328 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g01292 529 PRINTS E-class P450 group I signature 348 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g01292 529 PRINTS E-class P450 group I signature 390 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g01292 529 PRINTS E-class P450 group I signature 467 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g01292 529 PRINTS E-class P450 group I signature 477 500 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g01292 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 470 479 IPR017972 GO:0005506|GO:0016705
Cme10g01292 529 PANTHER CYTOCHROME P450 FAMILY MEMBER 17 524 - -
Cme10g01292 529 Pfam Cytochrome P450 91 524 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme05g00728 Cme-Chr5:8541852 Cme10g01292 Cme-Chr10:13976239 6.81E-155 dispersed
Cme10g01292 Cme-Chr10:13976239 Cme09g00147 Cme-Chr9:1077161 2.10E-103 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g01292 K20661 - csv:101216582 1024.62