Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g01384 ATGGGGTCGCCGGAGCTGAATCCCCTTCCACCGCTTCCTCGCCGGAATTTTGCAGACGATTATCGGAGGAATGTTGACGGTAATGATAATAATGATGACGACGACGATCGCGATGATGAAGAGTTTTTTTCACCAAGAGGGTCTTCCGTCGGCGGGAAGGAGAATGTGGGGAGTAATAGAAGATTGAGCCCTGTGAAGTTGTTTCATAATGTGGAAACTGAAAATTTTTTGAGGAAAAGCTATACTTCCAGTTTGAATTCTGGTTCTCCCTCTGTTTCTCTTCCCAATAGTCCTTCTCCGCCTTTGATGTTGAGCCCCACGAGCTTGAGATCAAAGTCTCCGGACTCCATTATCAGATTCCCTGTTCCTTTACGGCCATTGCCAACACTTCCAGTTCCGCCATCACCTTCGTTTTCCTCTGCTTCTTCGCCACTGGGAGGATCTGGGAACACCAAAAACTCGCCATCGAGGGATTCTGATTTGCCGGAGCTGCCTCGGCAGTTTTCAGATGGATCTAGGATGAATTACCAGCAACCATTGCCAGTGAAACTACCAACAGCCCCTCCTCTGCGTCCGCCACCGCCACCTCCTCCTCCTCCAAGGTTTTGGGAGATTCCTCAATCTTCCTCTCTTCTCAACAAGGACCCTAATCTAGGTCCACCAATACTCACCCTGCCAACAAGACCGATACTCTCACAGAACATAGGTCATATGTCTGCAGGGGAGCAATTAAACACCATTGTAGATGCAGAGAGAATGGAAGAAACTTTGAAGCCGAAACTGAAGGCATTACATTGGGACAAAGTTCGGACGAGCTCTGATCGAGCCATGGTGTGGGATCAGATCAAATCGAGTTCATTTCAGTTGAATGAGGAAATGATTGAATCACTTTTTATGGTAAATAACAATAATTCAAATATTATGAGCAAAGAAAATGGTAGTGTTCATCAGAACATGCCTTTAGGGAGCCAAGAGAATCGAGTTCTTGATCCTAAGAAGTCTCAGAATATTGCAATTTTGTTGAGGGCACTCAATGTTACCATAGAAGAAGTCTTCGAAGCCCTTTTGGAAGGAAATTCAGATGCTCTGTGTACTGAACTGCTCGAAAGTTTACTGAAAATGGCGCCAACTGAAGAAGAAGAGCGTAGTTTGAAAGAATACAAAGACGATTCACCTTTTAAACTTGGCCCCGCTGAGAAATTCCTCAAGGTAGTTCTTGATGTACCATTTGCTTTCAAAAGGGTGGATGCAATGCTTTACATGGCCAATTTCGATTCTGAGGTCGAGTACCTTGTTCGGTCCTTTACAACTCTTGAGGCTGCTTGTACAGAATTGAAGAACAGCAGAATGTTTCTCAAACTTCTTGAAGCAGTGCTCAAAACTGGGAACCGGATGAATGTAGGCACGGATAGAGGCGACGCTCATGCTTTTAAACTTGACACTCTTCTCAAGCTTGTTGATATCAAGGGCACTGATGGAAAAACTACTCTCTTGCATTTTGTAGTACAGGAGATTATTAGAGCTGAAGGTTATCGACACTCCACCTCCGATCACAACCTGACAGCTGATAATACTCAGCAATCTTCCTTGACAAATGACGTTGAGTTTCGAAAGCTTGGTCTTCAAGTCGTTTCGGGTCTTAGTAGGGAGCTATCCAATGTGAAAAAAGCTGCATTAATGGATGCAGATGTACTTATCCACGACGTAGGGAAACTTGCTGGAGGGATCACAAAAATCACAGAGGTCATTAGATTAAATGAAGACATGCTGAAAGGAGGAAATGGGTCGAATTTCTCTGACGCCATGAACAAGTTCTTGGGGAAGGCAGCAGAAGAAGTATCAAGGATACAAGTTCAAGAAGGCATTGCCCTCGCCAAGGTAAAGGAAATAACGGAATACTTCCACGGAAACCTAGCAAAAGAAGAAGCTCGGCCACTGCGTATTTTTATGGTGGTAAAGGATTTTCTTGCCATCTTAGATCAGGTATGCAAAGAAGTTGGAAGAATCAATGAAAGAACAATAGTGGGTTCGGCCCGTCAATATACGGGTGCTATGAATCCATGTCTTCCAACAGTTTTCCCCGGATTATGCGAAAGTCAGCGCTATGGTTCGTCTGATGACGATAGCTCATCTTCCTCATCTTAG 2145 44.48 MGSPELNPLPPLPRRNFADDYRRNVDGNDNNDDDDDRDDEEFFSPRGSSVGGKENVGSNRRLSPVKLFHNVETENFLRKSYTSSLNSGSPSVSLPNSPSPPLMLSPTSLRSKSPDSIIRFPVPLRPLPTLPVPPSPSFSSASSPLGGSGNTKNSPSRDSDLPELPRQFSDGSRMNYQQPLPVKLPTAPPLRPPPPPPPPPRFWEIPQSSSLLNKDPNLGPPILTLPTRPILSQNIGHMSAGEQLNTIVDAERMEETLKPKLKALHWDKVRTSSDRAMVWDQIKSSSFQLNEEMIESLFMVNNNNSNIMSKENGSVHQNMPLGSQENRVLDPKKSQNIAILLRALNVTIEEVFEALLEGNSDALCTELLESLLKMAPTEEEERSLKEYKDDSPFKLGPAEKFLKVVLDVPFAFKRVDAMLYMANFDSEVEYLVRSFTTLEAACTELKNSRMFLKLLEAVLKTGNRMNVGTDRGDAHAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRAEGYRHSTSDHNLTADNTQQSSLTNDVEFRKLGLQVVSGLSRELSNVKKAALMDADVLIHDVGKLAGGITKITEVIRLNEDMLKGGNGSNFSDAMNKFLGKAAEEVSRIQVQEGIALAKVKEITEYFHGNLAKEEARPLRIFMVVKDFLAILDQVCKEVGRINERTIVGSARQYTGAMNPCLPTVFPGLCESQRYGSSDDDSSSSSS 714
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 16051357 16056101 - MELO3C022610.2.1 Cme10g01384 340270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g01384 714 ProSiteProfiles Formin homology-2 (FH2) domain profile. 251 685 IPR015425 -
Cme10g01384 714 MobiDBLite consensus disorder prediction 1 65 - -
Cme10g01384 714 MobiDBLite consensus disorder prediction 139 160 - -
Cme10g01384 714 MobiDBLite consensus disorder prediction 16 30 - -
Cme10g01384 714 Pfam Formin Homology 2 Domain 255 659 IPR015425 -
Cme10g01384 714 PANTHER FORMIN-LIKE PROTEIN 2 1 711 - -
Cme10g01384 714 SUPERFAMILY Formin homology 2 domain (FH2 domain) 192 672 - -
Cme10g01384 714 MobiDBLite consensus disorder prediction 131 219 - -
Cme10g01384 714 MobiDBLite consensus disorder prediction 81 112 - -
Cme10g01384 714 Gene3D Formin, FH2 domain 259 682 IPR042201 -
Cme10g01384 714 SMART it6_source 251 674 IPR015425 -
Cme10g01384 714 MobiDBLite consensus disorder prediction 182 204 - -
Cme10g01384 714 PANTHER FORMIN-RELATED 1 711 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme10g01384 Cme-Chr10:16051357 Cme11g00355 Cme-Chr11:3644288 5.09E-173 dispersed
Cme10g01384 Cme-Chr10:16051357 Cme12g01971 Cme-Chr12:25543931 8.80E-28 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g01384 - - csv:101213912 1144.41