Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g01523 ATGTCATTAAATAATAAAAGTTTTTGTGCAAAGCTGTCCTCGAAAAACCTTCATTTTTTAAGCAAAGTTCCAGGTTTTATAGCAGCCTCTCCAAATGAACTACTACAGCTTCACACCACTCACTCCCCTAAGTTTCTTGGCCTACAAAGAGGCCATGGCCTTTGGAATTCTTCAAACTTAGCTTCTGATATAATTATTGGTGTACTTGACACTGGCATTTGGCCTGAGCATATAAGTTTTCAGGACAAAGCTCTCCCCCCTGTTCCCTCAAAGTGGAAAGGCATTTGCCAAACAGGTCCAAGCTTCTCACTTTCTAATTGTAACAAAAAACTCATTGGAGCAAGAACCTTCATTCAAGCCTATGAGGCCGCTGTCGGTAGATTGAATGCAACAGGGACATTTCGATCCGCACGAGACTCGGATGGCCACGGGACACACACAGCATCAACTGCTGCTGGAAATTTTGTAAACAGAGCAAGCTTTTATAACCAAGGAATGGGAGTAGCCACAGGGATGAGGTTCACTTCAAGGATCGCAGCATACAAGGTATGTTGGCCAGAAGGGTGTGCCAGTGCTGATATTTTAGCAGCGATGGATCACGCTGTTGCTGACGGTGTTGATGTTCTATCGATCTCCTTAGGCGGCGGTTCTAGTATAATTTACAGCGATCAAATTGCCATAGCTGCATTTGGTGCTATTCAAAAAGGGGTTTTTGTGTCATGTTCAGCTGGTAATTCTGGCCCATTTATCTCAACTGTTGGTAATGTAGCACCATGGGTCATGACTGTTGCTGCTAGTTACACTGATAGAACCTTCCCAACCACTGTAAGGCTTGGAAATGGAATGGTTTTTGAAGGTTCTTCTTTGTATTTTGGCAAGAACTTAAAGGAAACCCCACTTGTTTATAACAATACTGCTGGTGATGGACGAGAAACAAATTTTTGTACTCCTGGTTCACTTGACCCAACAATGGTAAAGGGAAAAATTGCTGTGTGTGAAAGAGGAACAAACTCAAGAACTGAAAAAGGAGAGCAAGTGAAATTAGCTGGAGGAGCTGGAATGATTCTGATCAACACAATACTTGAAGGTGAAGATCTTTTAGCTGATTCTCATGTTTTGCCAGCCACTTCTGTTGGAGTTTCGGCTGGCAAATCCATCTTAAACTACATAGCTTCCTCGAAACGTCAAGCGAAAGCATCAATCATGTTCAAAGGGACTAAATATGGAAGCCGAGCACCGAGAGTAGCGGCATTTTCTTCTCGAGGGCCTAGTTTTTATAAACCATACGTGATAAAGCCAGACATAACTGCGCCTGGTGTTAATATATTGGCTGCTTGGCCGCCGATTGTGAGCCCGAGTGAGCTTGAGTCTGACAAAAGAAGAGTGCTGTTCAATATCATTTCAGGGACTTCTATGTCTTGCCCTCATGTTAGTGGTTTAGCTGCATTGCTTAAATCAGTTCACAAGGATTGGTCGCCTGCCGCCATTAAATCGGCGCTCATGACAACAGCTTATGTTACTGATAACAAAAATCATCTCATTTCGGATGTCGGTCGTGCGAGTGGTGGTCCTGCGGATCCTTTTGCGTTCGGTTCTGGCCATGTTGATCCTGAGAAAGCTTCTGATCCGGGGCTCGTCTACGATATCGCACCCCAAGACTACATAACCTACTTGTGTAGCTTAAAGTATAATTCAACACAAATTGCTTTAGTTTCAAGAGGGAAGTTCACATGTTCATCAAAAAGGACATTTTTTCAGCCAGGAGACTTGAACTACCCTTCTTTCTCCGTGTTCATGAAGAAGGGAAAAAATGTTAATAGCACATTCAAGAGAACAGTGACAAATGTTGGTATCCCAAGGAGTGATTATACTGTGAGAATTTACAATCCAAAAGGAATAAGAATTATTGTGAAACCTGAGAAGTTGAGTTTTGTGAAATTGGGAGAAAAGTTGAGTTACAAAGTGAGTTTTGTTGCATTGGGGAAAAGAAAAAGTTTGGATGATTTTTCCTTTGGATCTCTTGTTTGGCACTCAGGAACATATGTT 2046 42.33 MSLNNKSFCAKLSSKNLHFLSKVPGFIAASPNELLQLHTTHSPKFLGLQRGHGLWNSSNLASDIIIGVLDTGIWPEHISFQDKALPPVPSKWKGICQTGPSFSLSNCNKKLIGARTFIQAYEAAVGRLNATGTFRSARDSDGHGTHTASTAAGNFVNRASFYNQGMGVATGMRFTSRIAAYKVCWPEGCASADILAAMDHAVADGVDVLSISLGGGSSIIYSDQIAIAAFGAIQKGVFVSCSAGNSGPFISTVGNVAPWVMTVAASYTDRTFPTTVRLGNGMVFEGSSLYFGKNLKETPLVYNNTAGDGRETNFCTPGSLDPTMVKGKIAVCERGTNSRTEKGEQVKLAGGAGMILINTILEGEDLLADSHVLPATSVGVSAGKSILNYIASSKRQAKASIMFKGTKYGSRAPRVAAFSSRGPSFYKPYVIKPDITAPGVNILAAWPPIVSPSELESDKRRVLFNIISGTSMSCPHVSGLAALLKSVHKDWSPAAIKSALMTTAYVTDNKNHLISDVGRASGGPADPFAFGSGHVDPEKASDPGLVYDIAPQDYITYLCSLKYNSTQIALVSRGKFTCSSKRTFFQPGDLNYPSFSVFMKKGKNVNSTFKRTVTNVGIPRSDYTVRIYNPKGIRIIVKPEKLSFVKLGEKLSYKVSFVALGKRKSLDDFSFGSLVWHSGTYV 682
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 19233796 19236144 - MELO3C018317.2.1 Cme10g01523 340409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g01523 682 Gene3D - 269 408 - -
Cme10g01523 682 Gene3D - 558 682 - -
Cme10g01523 682 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 7 681 IPR045051 -
Cme10g01523 682 Gene3D Peptidase S8/S53 domain 63 554 IPR036852 GO:0004252|GO:0006508
Cme10g01523 682 SUPERFAMILY PA domain 297 393 IPR046450 -
Cme10g01523 682 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 66 77 IPR023827 -
Cme10g01523 682 ProSiteProfiles Serine proteases, subtilase domain profile. 45 541 - -
Cme10g01523 682 ProSitePatterns Serine proteases, subtilase family, serine active site. 469 479 IPR023828 -
Cme10g01523 682 SUPERFAMILY Subtilisin-like 37 545 IPR036852 GO:0004252|GO:0006508
Cme10g01523 682 Pfam PA domain 298 386 IPR003137 -
Cme10g01523 682 CDD PA_subtilisin_like 275 394 - -
Cme10g01523 682 CDD Peptidases_S8_3 35 505 IPR034197 -
Cme10g01523 682 Pfam Subtilase family 62 519 IPR000209 GO:0006508|GO:0008236
Cme10g01523 682 Pfam Fibronectin type-III domain 589 681 IPR041469 -
Cme10g01523 682 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.1 7 681 - -
Cme10g01523 682 PRINTS Subtilisin serine protease family (S8) signature 468 484 IPR015500 -
Cme10g01523 682 PRINTS Subtilisin serine protease family (S8) signature 61 80 IPR015500 -
Cme10g01523 682 PRINTS Subtilisin serine protease family (S8) signature 139 152 IPR015500 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme10g01523 Cme-Chr10:19233796 Cme11g00387 Cme-Chr11:3917870 0 dispersed
Cme10g01523 Cme-Chr10:19233796 Cme10g01524 Cme-Chr10:19274980 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g01523 - - csv:101222234 1266.14