Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g01524 ATGGGGTTTAGAGAGGTTTGGGTGTTGTCAATAATGCTTGCAATTTCAAGTGCTGTTGTGGATCAACAAACTTACATTATTCACATGGACACCACAAAGATGGTCACCCCCAACCCTGAACAATGGTACACAGACATTATTGATTCTGTCAATGAACTCTCGTCTCTCGACGACAATGAAGAAGCATCAAATGCTGCAGAGATTCTCTATGTTTACAAAACTGCCCTGTCAGGTTTTGCTGCAAAACTCACCTCAAAAAAACTGCATTCTTTGAGCAAAATTCCAGGGTTTCTAGCTGCCACTCCAAATGAGCTACTGCAACTTCACACCACTCACTCTCCTCAGTTTCTTGGCCTACAAAGAGACCATGGCCTTTGGAATTTCTCAAACCTAGCTTCTGATATAATTATTGGTTTGCTTGACACTGGCATTTGGCCTGAGCATATAAGTTTTCAAGACAAGGGTCTTTCCTCTGTGCCCTTAAAATGGAAAGGCATTTGCCAAACAGGCCCAAGGTTCTCTTCTTCTAATTGTAACAAAAAGCTCATTGGAGCAAGTGCTTACATTAAAGGATACGAGGCCATCGTCGGTAGATTGAACGAAACAGGGACTTTCCGATCCCCCCGAGACTCGGATGGCCACGGGACACACACGGCTTCTACTGCTGCAGGAAGCATTGTTGATAACGCAAGCTTTTATAACCAAGGCATGGGAGTAGCCTCTGGAATGAGGTTCACCTCAAGAATCGTAGCATACAAAGTATGTTGGCCTCTAGGCTGTGCGAATGCCGATATTCTCGCAGCTATGGACAGCGCCGTTGCTGATGGAGTCGATGTTTTATCACTCTCTTTGGGAGGCGGTTCTAGTTCTTTTTACAAAGATAACATTGCCATAGCAGCATTTGGTGCTATTCAAAAAGGGGTTTTTGTTTCATGTTCAGCTGGTAATTCTGGTCCGTCACCCTCAACTGTTGGTAATGCAGCCCCATGGATCATGACAGTCGCTGCTAGTTACACCGACAGAACTTTCCCAACCACTGTCAAACTTGGAAATGGGCAAGTTTTTGAAGGCTCTTCTTTGTATTATGGCAAGAGCATAAATGAACTCCCGCTTGTTTATAACAATACTGCTGGTGATGGACAAGAAACAAATGTTTGCATTGCTGGTTCCCTTGACCCATCAATGGTGAAGGGAAAAATTGTTATATGTGAAAGAGGAACAATCTCAAGAACTGAAAAAGGAGAGCAAGTGAAGTTAGCTGGAGGAACTGGAATGATTTTAATTAATACACAATTTGAAGGTGAAGAGCTTTTTGCTGACCCTCATGTTTTGCCAGCAACTACTCTCGGAGCTTCAGCTGGCAAAGCCATCTTAGACTATATAGCATCCTCGAAAACACAAGCAAAAGCTTCGATTGTGTTCGAAGGGACTAAATATGGAAGTCAAGCACCGAGAGTTGCAGCATTTTCTTCTCGAGGGCCAAGTTTAGTTGGACCTGATGTTATAAAGCCAGACGTAACGGCACCTGGTGTTAATATATTAGCTGCTTGGCCTCCAATTGTTAGCCCGAGTGAGCTCGCGTCTGATACAAGAAGAGTGATGTTCAACATCATTTCAGGGACTTCTATGTCTTGCCCTCATGTTAGCGGTTTAGCTGCATTGCTTAAATCGGCTCACAACGATTGGTCGCCTGCTGCGATTAAATCTGCGCTCATGACCACCGCCTACGTTACTGACAGCAAAATGAGTCTCATTTCTGACGTCGGTCAAGCTAATGGCGAACCGGCAACCCCCTTTACATTTGGTTCTGGCCATGTCGATCCCGAGAAAGCATCGGATCCCGGGCTCATCTACGATATCACACCCCAAGATTACATAAACTACTTATGTAGCTTGAAGTATAACTCATCACAAATTGCTTTAGTTTCAAGAGGGAATTTGACTTGTTCATCAAAAAGAACAGTTGTTAAGCCAGGAGACTTGAACTACCCTTCTTTCTCTGTGTTCATGAAGAAGAAGGCCAAAAAAGTTAGTATTACATTGAAAAGAACGGTGACAAATGTTGGTATCACAAGGAGTGATTACACTGTTAAAATCAACAATCCAAAAGGAGTAACAGTTATTGTGAAGCCTGAGAAGTTAAGTTTTGGGAGTTTGGGAGAGCAGTTGAGTTACAAAGTGAGTTTTGTTTCATTAGGAGGAAAGGAAGCTTTGGATAAGTTTTCCTTTGGATCTCTTGTTTGGATCTCAGGAAAATATGCTGTTAGAAGTCCTATAGTAGTAACTTGGCAATAG 2295 43.01 MGFREVWVLSIMLAISSAVVDQQTYIIHMDTTKMVTPNPEQWYTDIIDSVNELSSLDDNEEASNAAEILYVYKTALSGFAAKLTSKKLHSLSKIPGFLAATPNELLQLHTTHSPQFLGLQRDHGLWNFSNLASDIIIGLLDTGIWPEHISFQDKGLSSVPLKWKGICQTGPRFSSSNCNKKLIGASAYIKGYEAIVGRLNETGTFRSPRDSDGHGTHTASTAAGSIVDNASFYNQGMGVASGMRFTSRIVAYKVCWPLGCANADILAAMDSAVADGVDVLSLSLGGGSSSFYKDNIAIAAFGAIQKGVFVSCSAGNSGPSPSTVGNAAPWIMTVAASYTDRTFPTTVKLGNGQVFEGSSLYYGKSINELPLVYNNTAGDGQETNVCIAGSLDPSMVKGKIVICERGTISRTEKGEQVKLAGGTGMILINTQFEGEELFADPHVLPATTLGASAGKAILDYIASSKTQAKASIVFEGTKYGSQAPRVAAFSSRGPSLVGPDVIKPDVTAPGVNILAAWPPIVSPSELASDTRRVMFNIISGTSMSCPHVSGLAALLKSAHNDWSPAAIKSALMTTAYVTDSKMSLISDVGQANGEPATPFTFGSGHVDPEKASDPGLIYDITPQDYINYLCSLKYNSSQIALVSRGNLTCSSKRTVVKPGDLNYPSFSVFMKKKAKKVSITLKRTVTNVGITRSDYTVKINNPKGVTVIVKPEKLSFGSLGEQLSYKVSFVSLGGKEALDKFSFGSLVWISGKYAVRSPIVVTWQ 764
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 19274980 19279195 - MELO3C018316.2.1 Cme10g01524 340410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g01524 764 PRINTS Subtilisin serine protease family (S8) signature 132 151 IPR015500 -
Cme10g01524 764 PRINTS Subtilisin serine protease family (S8) signature 210 223 IPR015500 -
Cme10g01524 764 PRINTS Subtilisin serine protease family (S8) signature 539 555 IPR015500 -
Cme10g01524 764 SUPERFAMILY PA domain 393 461 IPR046450 -
Cme10g01524 764 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.1 15 764 - -
Cme10g01524 764 CDD Peptidases_S8_3 106 576 IPR034197 -
Cme10g01524 764 Gene3D - 629 763 - -
Cme10g01524 764 SUPERFAMILY Subtilisin-like 108 616 IPR036852 GO:0004252|GO:0006508
Cme10g01524 764 CDD PA_subtilisin_like 346 466 - -
Cme10g01524 764 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 15 764 IPR045051 -
Cme10g01524 764 ProSiteProfiles Serine proteases, subtilase domain profile. 116 612 - -
Cme10g01524 764 Pfam PA domain 370 457 IPR003137 -
Cme10g01524 764 ProSitePatterns Serine proteases, subtilase family, serine active site. 540 550 IPR023828 -
Cme10g01524 764 Gene3D - 340 479 - -
Cme10g01524 764 Gene3D Peptidase S8/S53 domain 134 625 IPR036852 GO:0004252|GO:0006508
Cme10g01524 764 Pfam Fibronectin type-III domain 660 761 IPR041469 -
Cme10g01524 764 Pfam Peptidase inhibitor I9 24 109 IPR010259 -
Cme10g01524 764 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 12 109 IPR037045 -
Cme10g01524 764 Pfam Subtilase family 133 604 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g02101 Cme-Chr3:28316600 Cme10g01524 Cme-Chr10:19274980 1.95E-175 dispersed
Cme04g00944 Cme-Chr4:12697460 Cme10g01524 Cme-Chr10:19274980 0 dispersed
Cme08g00624 Cme-Chr8:4015273 Cme10g01524 Cme-Chr10:19274980 0 dispersed
Cme09g01692 Cme-Chr9:21572971 Cme10g01524 Cme-Chr10:19274980 0 dispersed
Cme09g01695 Cme-Chr9:21593972 Cme10g01524 Cme-Chr10:19274980 0 dispersed
Cme10g01524 Cme-Chr10:19274980 Cme11g00387 Cme-Chr11:3917870 0 dispersed
Cme12g00800 Cme-Chr12:14495397 Cme10g01524 Cme-Chr10:19274980 0 dispersed
Cme10g01523 Cme-Chr10:19233796 Cme10g01524 Cme-Chr10:19274980 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g01524 - - csv:101210266 1425.22