Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g01527 ATGGAAGACATTGGTAACACTGTTGTTCCCAACGCCGTGTTGGTGACGCGTCAGGAATCTGCCTCCCGACACATTTCTTCCGACGGTCTTCTCGACGTCTATTCCTGCATCAAGAACTTAATTCTCGACGTTATTTACACTTCTGTCAATGTTTTTGTTTATAAAGGAGGCGTTTCTATGCAGAAACATTTCATTGTTTTCCTGGAGAATGGGCGAACTATTTTAAATGAGGTCGATGGTCTAGATATAAATCTCAATGTTCTCATGTCAGTGAAGGAAAGCCATGTGGAAGCAAAAGAGTCTATGGTGTACAGTTACACAAATAACTTCAATGCCTTCGCTGCCAAGCTTACTGAGGCAGAGGCCAAAACGTTGTCAGAGAGGGGAGATGTGCAGCATGTGATTCCAAACAGATACAGAAAGCTACAAACAACAAGATCTTGGGACTTCCTTGGGTTTCCTATCAATGCAAAAAGGAAAACAAGACAGGAGAGTGACATTATTGTGGGCCTATTTGATACTGGAATCACTCCAACGGCGGATAGCTTTAAAGATGATGGGTTTGGTCCTCCACCCAAAAAATGGAAAGGCACCTGTGACCATTTTGCCAATTTCAGTGGCTGCAACAATAAACTCATCGGAGCAAGATATTTCAAACTAGATGGCCTCACCGAGCCCTTGGACATTTTGTCGCCCATAGACATTAACGGTCATGGCACACACACATCGTCAACAGCGACCGGCAATGTAATCACTGGAGCCAACCTCTCTGGCCTGGCTCAAGGAACTGCCCGTGGCGGTGTGCCATCGGCCAGAGTAGCCATGTACAAGGTTTGCTGGACTAGCACCGGATGCTCCGATATGGATCTTCTGGCTGCCTTTGACGCCGCCATACAGGATGGCGTCGATGTCATTTCAATATCGATTGCTGGCATTGGCTATGGCAATTACACTGAGGACCCGATCTCTATCGGTGCATTTCATGCCATGAAGAAGGGCATCATCACTGTGACGGCCGCCGGGAACAATGGCCCGAGTGCCGGCACTGTTGTGAACCACGCGCCGTGGATCTTGACGGTTGCTGCCAGTTCAATTGATCGGACATTTATCAGTCCAGTCGAGTTGGGCAACGGGAAGAACATCTCTGGGGTAGGAATAAACTTATTCAATCCAGAGAAAAAAATGTACAAATTAGTGAGTGGAGAAGATGTGGCAAAGAACATAGAGAGCAAAGATGATGCAACGTATTGTGTAGAGAACTCACTTGATCCAAGCAAGGTGAAAGACAGTATTGTGTTTTGCAAATTGCTGACATGGGGAGCTGATTCGGCTGTCAAATCAATTGGTGCTGCTGGTGCTATCCTTCAAAGTGATCAGTTTCTTGACAATACTGATATCTTCATGGCCCCTTCCACTTTGGTTAGTAGCTTTGTTGGAGCTACTATTGACTCCTACATCCACTCCTCAAGAACACCAACAGCAGTGATATACAAAACAAGACAACACATAGGAGCAGCTCCAATTGTTGCTCCCTTCTCATCCAGAGGCCCAAATCCAGGCTCCACCCGCATTCTAAAGCCGGACATAGCAGCACCAGGAGTCAACATATTGGCGGGTTACACGCCATTGAAATCATTGACGGGGCTGAAAGGTGACACTCAATTCTCTAAATTTACACTCATGTCTGGCACTTCCATGGCTTGTCCCCATGTTGCCGCTGCCGCCGCCTATGTCAAATCTTTCCACCCTCTTTGGTCTCCGGCCGCCATTAGATCCGCCTTGCTTACCACCGCGAAACCAATTAGTCGACGTGGGAACCCTGACGGAGAATTCGGGTACGGTGCCGGCAACCTTAATCCAGGTAAAGCCAAAAACCCTGGCCTAATCTACGACCTCAATGAGATGTCGTACATTCAATTCCTTTGTAGCGAAGGTTACAGTGGATCTTCAATTTCCATCCTCACTGGAACCAAATCCATCAATTGCGCCACAATAATCCGTGGCCAAGGCTATGACTCTCTCAATTACCCAACCTTTCAACTCAGACTCCAAAGCACCAGACAACCGACGACCGCCGTGTTCTGGCGGGAAGTGACCAATGTCGGCACTCCTGTTTCAGTTTACAATACCACGGTCTGGGCTCCCCCTGGGGTGGAGATCACGGTAGAGCCAGCGACTTTGTCGTTCTCATATCTACTGCAAAAGGAGAGGTTTAAGGTTGTTGTGAAGGCCAATCCTTTGCCGTCGAACAAAATGGTATCGGGTTCGATCACTTGGTTTAATCCTCGATATGTTGTGAGAAGTCCGATTGTTGTTTATAGTCCATCGGGATGA 2334 47.43 MEDIGNTVVPNAVLVTRQESASRHISSDGLLDVYSCIKNLILDVIYTSVNVFVYKGGVSMQKHFIVFLENGRTILNEVDGLDINLNVLMSVKESHVEAKESMVYSYTNNFNAFAAKLTEAEAKTLSERGDVQHVIPNRYRKLQTTRSWDFLGFPINAKRKTRQESDIIVGLFDTGITPTADSFKDDGFGPPPKKWKGTCDHFANFSGCNNKLIGARYFKLDGLTEPLDILSPIDINGHGTHTSSTATGNVITGANLSGLAQGTARGGVPSARVAMYKVCWTSTGCSDMDLLAAFDAAIQDGVDVISISIAGIGYGNYTEDPISIGAFHAMKKGIITVTAAGNNGPSAGTVVNHAPWILTVAASSIDRTFISPVELGNGKNISGVGINLFNPEKKMYKLVSGEDVAKNIESKDDATYCVENSLDPSKVKDSIVFCKLLTWGADSAVKSIGAAGAILQSDQFLDNTDIFMAPSTLVSSFVGATIDSYIHSSRTPTAVIYKTRQHIGAAPIVAPFSSRGPNPGSTRILKPDIAAPGVNILAGYTPLKSLTGLKGDTQFSKFTLMSGTSMACPHVAAAAAYVKSFHPLWSPAAIRSALLTTAKPISRRGNPDGEFGYGAGNLNPGKAKNPGLIYDLNEMSYIQFLCSEGYSGSSISILTGTKSINCATIIRGQGYDSLNYPTFQLRLQSTRQPTTAVFWREVTNVGTPVSVYNTTVWAPPGVEITVEPATLSFSYLLQKERFKVVVKANPLPSNKMVSGSITWFNPRYVVRSPIVVYSPSG 777
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 19335682 19345378 - MELO3C018314.2.1 Cme10g01527 340413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g01527 777 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 64 773 IPR045051 -
Cme10g01527 777 CDD Peptidases_S8_3 141 598 IPR034197 -
Cme10g01527 777 PRINTS Subtilisin serine protease family (S8) signature 164 183 IPR015500 -
Cme10g01527 777 PRINTS Subtilisin serine protease family (S8) signature 234 247 IPR015500 -
Cme10g01527 777 PRINTS Subtilisin serine protease family (S8) signature 562 578 IPR015500 -
Cme10g01527 777 ProSiteProfiles Serine proteases, subtilase domain profile. 147 624 - -
Cme10g01527 777 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.14 64 773 - -
Cme10g01527 777 CDD PA_subtilisin_like 373 496 - -
Cme10g01527 777 ProSitePatterns Serine proteases, subtilase family, serine active site. 563 573 IPR023828 -
Cme10g01527 777 Gene3D - 641 775 - -
Cme10g01527 777 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 53 143 IPR037045 -
Cme10g01527 777 Gene3D Peptidase S8/S53 domain 166 637 IPR036852 GO:0004252|GO:0006508
Cme10g01527 777 Gene3D - 366 503 - -
Cme10g01527 777 Pfam Subtilase family 165 614 IPR000209 GO:0006508|GO:0008236
Cme10g01527 777 SUPERFAMILY Subtilisin-like 142 628 IPR036852 GO:0004252|GO:0006508
Cme10g01527 777 Pfam Peptidase inhibitor I9 90 142 IPR010259 -
Cme10g01527 777 Pfam Fibronectin type-III domain 674 772 IPR041469 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme08g02046 Cme-Chr8:25767593 Cme10g01527 Cme-Chr10:19335682 6.74E-09 dispersed
Cme10g01527 Cme-Chr10:19335682 Cme10g00976 Cme-Chr10:7674898 0 dispersed
Cme10g01527 Cme-Chr10:19335682 Cme10g01530 Cme-Chr10:19427375 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g01527 - - cmo:103495168 1528.84