Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g01530 ATGTCATTATCGAAATCTTCTCGTCTTCTTGTCTTTGCTCTTTTCATCATCGTAGGGTGCGTTGTGCAGGGAATGGACCGCGACGAGAACGAGGAAAAGAATCATTTTATTGTATTCTTGCAAAATAAACCTGTTTTAAATGAGGTTGATGCAGTAGAAACACATCTAAGTGTTCTCATGTCAGTGAAGAAAAGCCATGCGGAAGCAAGTGAATCGATGGTTTATAGTTACACGAAAAGCTTCAATGCCTTTGCAGCTAAACTTAGTGATCATGAAGCCAAATTATTGTCAACGAGAAAAGATGTGCATCATGTGATCCCAAACACATATAGAAAGCTACAAACAACAAGATCTTGGGACTTCATTGGATTGTCTTCTAATGCAAGAAGAAGAACCAAACATGAGAGTGACATTATCGTGGGCTTATTCGATACCGGGATCACTCCGACGGCGGATAGCTTTAGAGATGATGGGTTTGGTCCTCCACCCAAAAAATGGAAAGGCACATGTCACCACTTTGCCAATTTCACTGCCTGCAATAAAAAACTTATCGGAGCAAGATATTTCAAGCTCGACGGCAATCCCGATCCCTCGGACATCTTGTCACCGGTAGACACTGATGGCCATGGCACTCATACATCATCAACCGCAACGGGCAATGCAGTTGCAGGGGCCAGCCTCTCTGGTCTGGCCGAAGGAACTGCCCGCGGTGGCGTGCCGTCCGCGAGAGTTGCCATGTATAAGGTCTGCTGGGCTAGTAGCGGGTGCTCCGATATGGATATCCTGGCCGCCTTTGACGCTGCTATACAGGATGGTGTTGATGTCATTTCGATATCGATTGGGGGAGGCGGCTTCAACAATTATTCCGATGACTCGATTTCCATCGGCGCATTTCATGCCATGAAGAAGGGTATCATCACTGTGACCTCCGCCGGGAACGGTGGTCCGATGGCCGGCAGTGTAGTCAACCACGCGCCGTGGATTGTGACGGTTGCTGCCAGTTCCATTGATCGGAAATTTATCAGCCCACTAGAGTTGGGCAATGGGAAGAACATCTCTGGAGTAGGGATAAACATCTTCAATCCGAAGAAAAAAATGTACCCATTAGTGAGTGGAGGGGATGTGGCAAGGAATTCAGAGAGCAAAGATACTGCAAGCTTTTGCTTAGAAGACTCACTTGATCCAACCAAAGTGAAAGGCAGCCTTGTGTTTTGCAAATTGTTGACTTGGGGAGCTGATTCTGTTATAAAATCCGTTGGAGCAAATGGTGTTATCATTCAAAGTGATCAGTTTCTTGATAATGCTGACATCTTCATGGCCCCTGCCACCATGGTTAGCAGCTCGGTTGGTACTATCATTTACACCTACATCAAGTCCACCAGAACGCCAACTGCGGTGATATATAAAACAAGACAACTCAAAGCAAAAGCTCCAATGGTAGCTTCCTTCTCATCTAGAGGCCCAAACCCAGGCTCCCATCGTATTCTAAAGCCGGACATAGCAGCCCCAGGAGTGAACATATTGGCTGGTTATACGCCATTGAAGTCATTGACAGGGCAAAAGGGTGACACTCAATACTCCAAATTCACAATCATGTCTGGTACTTCCATGGCCTGCCCCCATGTCGCCGCCGCTGCCGCCTACGTCAAATCTTTCCATCCTCTTTGGTCTCCCGCCGCCATCAGATCCGCCTTGCTCACCACCACGAGACCGATTAGCCGGCGACTGAACCCTGAGGGTGAATTTGCCTATGGTGCTGGCAACCTAAATCCATCAAAAGCCATAAGTCCTGGCCTAATCTACGATCTCAATGAAATGTCGTATATCCAATTCCTTTGCAGCGAAGGCTACACTGGATCTTCAATTGCTGTCCTCGCTGGAACCAAATCCATAAACTGTTCCACTCTAATCCCCGGCCATGGACACGACTCTCTCAATTATCCAACTTTTCAGCTCAGTCTCAGAAGCACCAAGCAACCGATGACAACAACATTCCGACGACAAGTCACCAACGTCGGCCAGCCTGTCTCTGTCTACAATGCCACCATCAAGGCTCCTCCTGGGGTGAAGATCACGGTTACGCCCACCACTCTGTCATTTTCACGGTTACTTCAGAAGAGGAGTTTTAAAGTTGTTGTGAAGGCCAGTCCTTTGCAATCGGCAAAAATGGTGTCGGGATCACTTGCTTGGGTTGGTGATCGACATGTTGTGAGAAGTCCTATTGTTGTTTATAGTCCATGA 2241 47.39 MSLSKSSRLLVFALFIIVGCVVQGMDRDENEEKNHFIVFLQNKPVLNEVDAVETHLSVLMSVKKSHAEASESMVYSYTKSFNAFAAKLSDHEAKLLSTRKDVHHVIPNTYRKLQTTRSWDFIGLSSNARRRTKHESDIIVGLFDTGITPTADSFRDDGFGPPPKKWKGTCHHFANFTACNKKLIGARYFKLDGNPDPSDILSPVDTDGHGTHTSSTATGNAVAGASLSGLAEGTARGGVPSARVAMYKVCWASSGCSDMDILAAFDAAIQDGVDVISISIGGGGFNNYSDDSISIGAFHAMKKGIITVTSAGNGGPMAGSVVNHAPWIVTVAASSIDRKFISPLELGNGKNISGVGINIFNPKKKMYPLVSGGDVARNSESKDTASFCLEDSLDPTKVKGSLVFCKLLTWGADSVIKSVGANGVIIQSDQFLDNADIFMAPATMVSSSVGTIIYTYIKSTRTPTAVIYKTRQLKAKAPMVASFSSRGPNPGSHRILKPDIAAPGVNILAGYTPLKSLTGQKGDTQYSKFTIMSGTSMACPHVAAAAAYVKSFHPLWSPAAIRSALLTTTRPISRRLNPEGEFAYGAGNLNPSKAISPGLIYDLNEMSYIQFLCSEGYTGSSIAVLAGTKSINCSTLIPGHGHDSLNYPTFQLSLRSTKQPMTTTFRRQVTNVGQPVSVYNATIKAPPGVKITVTPTTLSFSRLLQKRSFKVVVKASPLQSAKMVSGSLAWVGDRHVVRSPIVVYSP 746
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 19427375 19435199 + MELO3C018312.2.1 Cme10g01530 340416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g01530 746 Pfam Peptidase inhibitor I9 36 113 IPR010259 -
Cme10g01530 746 ProSitePatterns Serine proteases, subtilase family, serine active site. 534 544 IPR023828 -
Cme10g01530 746 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Cme10g01530 746 PRINTS Subtilisin serine protease family (S8) signature 205 218 IPR015500 -
Cme10g01530 746 PRINTS Subtilisin serine protease family (S8) signature 533 549 IPR015500 -
Cme10g01530 746 ProSiteProfiles Serine proteases, subtilase domain profile. 118 595 - -
Cme10g01530 746 Gene3D Peptidase S8/S53 domain 137 608 IPR036852 GO:0004252|GO:0006508
Cme10g01530 746 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Cme10g01530 746 SUPERFAMILY Subtilisin-like 120 595 IPR036852 GO:0004252|GO:0006508
Cme10g01530 746 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 114 IPR037045 -
Cme10g01530 746 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 36 744 IPR045051 -
Cme10g01530 746 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.14 36 744 - -
Cme10g01530 746 CDD PA_subtilisin_like 344 467 - -
Cme10g01530 746 Pfam Fibronectin type-III domain 645 743 IPR041469 -
Cme10g01530 746 Pfam Subtilase family 136 587 IPR000209 GO:0006508|GO:0008236
Cme10g01530 746 Gene3D - 337 473 - -
Cme10g01530 746 Gene3D - 612 745 - -
Cme10g01530 746 CDD Peptidases_S8_3 112 568 IPR034197 -
Cme10g01530 746 MobiDBLite consensus disorder prediction 199 219 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g02414 Cme-Chr4:30779716 Cme10g01530 Cme-Chr10:19427375 0 dispersed
Cme08g01214 Cme-Chr8:8559979 Cme10g01530 Cme-Chr10:19427375 0 dispersed
Cme10g01530 Cme-Chr10:19427375 Cme10g00976 Cme-Chr10:7674898 0 dispersed
Cme10g01527 Cme-Chr10:19335682 Cme10g01530 Cme-Chr10:19427375 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g01530 - - csv:101206801 1341.25