Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g01536 ATGATTGAAAAGGAATTTTTCACTGAATATGGTGAAGCTACTCAATACGAGATCGAAGAAGTTGTTGGTAAAGGGAGCTATGGAGTTGTGGCATCTGCCATTGACACTCATTCTGGTGAGAAAGTTGCTATCAAGAAGATAAATAATGTGTTTGAGCATGTTTCTGATGCCACGAGGATTCTAAGAGAAATTAAGCTTCTTCGGTTTCTTCGACATCCTGATATTGTTGATATAAAACATATAATGCTCCCTCCATCCAGAAGGGAGTTCAAAGATTTATACATTGTTTTTGAGTTGATGGAGTGTGATCTTCATCATGTACTAAAAACTAATGATGATCTCACTCCTCAGCATCATCAATTTTTCTTATATCAACTTCTTAGAGCATTGAAGTATATACATTCAGCTCATGTGTTCCATAGAGACTTGAAGCCGAAGAATATACTTGCCAATGCAGACTGCAAGCTGAAGATCTGTGACTTTGGACTTGCACGTGCATCTTTCAATGATGCCCCGTCTGCTATCTTTTGGACTGATTATGTCGCTACTCGATGGTACCGTGCTCCTGAACTTTGTGGTTCGTTTTTCTCAAAGTATACACCAGCTATTGATATTTGGAGCATAGGATGTATATTTGCTGAAATGTTGGCAAGCAAGCCTTTGTTCCCTGGGAAAAGTGTTGTCCATGAGCTGGATCTAATAACTGACCTACTTGGTACCCCTTCAGCTGAATGTATTGCTAAGATTCGTAATGAAAAGGCTAAAAGGTATTTGAGTGGCATGAGAAAAAAAGATCCGATACCTCTGTCGAAAAAGTTTCCTAATGCAGACCCACTAGCTCTTCGTTTACTTGAACGTCTGCTTGCATTTGATCCTGATGATCGCCCTTCCGCTGAGGAGGCACTAGCTGATCCTTATTTCCATGGACTGGCTAATCTGAAGGATGAACCATCCAGGCAACCCATTTCAAAACTCGAGTTTGAGTTTGAAAGGAGAAAGTTGACCAAAGATGATGTCAGGGAGCTTATATATAGAGAAATTTTGGAGTATCACCCTCAAATGCTTAAGGAATACCTTCAAGGTTCTGGGAGCCACTTTTTGTATCCCAGTGGAATTGACCGATTCAAGCGACAATTTGATCATCTTGAGGAACGTTCTGGTAAAGGTGAGAGAGGCAGTCCACTTCTAAGGAAGCATGCCTCCTTGCCTAGGTATATAATTCGTATTTGA 1230 40.49 MIEKEFFTEYGEATQYEIEEVVGKGSYGVVASAIDTHSGEKVAIKKINNVFEHVSDATRILREIKLLRFLRHPDIVDIKHIMLPPSRREFKDLYIVFELMECDLHHVLKTNDDLTPQHHQFFLYQLLRALKYIHSAHVFHRDLKPKNILANADCKLKICDFGLARASFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLASKPLFPGKSVVHELDLITDLLGTPSAECIAKIRNEKAKRYLSGMRKKDPIPLSKKFPNADPLALRLLERLLAFDPDDRPSAEEALADPYFHGLANLKDEPSRQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLKEYLQGSGSHFLYPSGIDRFKRQFDHLEERSGKGERGSPLLRKHASLPRYIIRI 409
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 19536359 19542328 - MELO3C018306.2.1 Cme10g01536 340422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g01536 409 SUPERFAMILY Protein kinase-like (PK-like) 13 312 IPR011009 -
Cme10g01536 409 ProSitePatterns MAP kinase signature. 51 154 IPR003527 GO:0004707|GO:0005524|GO:0006468
Cme10g01536 409 Gene3D Transferase(Phosphotransferase) domain 1 102 330 - -
Cme10g01536 409 CDD STKc_TDY_MAPK 15 352 - -
Cme10g01536 409 ProSitePatterns Protein kinases ATP-binding region signature. 22 46 IPR017441 GO:0005524
Cme10g01536 409 Gene3D Phosphorylase Kinase; domain 1 32 353 - -
Cme10g01536 409 SMART serkin_6 16 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme10g01536 409 ProSiteProfiles Protein kinase domain profile. 16 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme10g01536 409 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 4 400 - -
Cme10g01536 409 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 4 400 - -
Cme10g01536 409 Pfam Protein kinase domain 16 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme10g01536 Cme-Chr10:19536359 Cme11g01943 Cme-Chr11:27494941 0 dispersed
Cme10g01536 Cme-Chr10:19536359 Cme02g01691 Cme-Chr2:24013113 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65215 PF00069 Pkinase 3.20E-67 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g01536 - - csv:101204645 805.823