Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g01593 ATGACTGAGGCTAAATTGTTGGCTCGTGTGCAGCACAGAAATGTTGTCAATTTGTTGGGATACTGTGTGCATGGTTCAGAGAAACTACTGGTTTACGAATACGTCATGAATGAGAGCCTCGACAAGCTTCTCTTTAAATCCAGCAGACGAGGAGAACTTGATTGGAAGAGGAGATATGACATAATCTTTGGCATAGCACGAGGGTTGCAATATCTTCATGTAGACTCACATAATGTCATTATCCATCGTGACATAAAGGCTAGTAACATTTTGTTGGATGATAAATGGGTCCCTAAAATTGCGGATTTTGGCATGGCTCGTCTCTTCCCTGAAGATCAAACTCATGTCAATACTCGTGTTGCTGGGACAAATGGATATATGGCTCCCGAATATGTAATGCACGGACATCTATCTGCAAAGGCAGACGTTTTTAGCTTTGGCGTTTTGGTTTTGGAACTTATAAGTGGCCAGCGAAATTCGTCATTTACTTCATTTATGGATGCGGAGAATCTACTTGATTGGGCTTACAAACTATACAAGAAGGGAAGGAGCTTGGAGATCATGGACCCAACACTAGCATCATCAGCTGATCCTGACCAAGTTACGATGTGCATTCAAATTGGATTGCTCTGCACGCAAGGCGATCCACACCTACGGCCGACCATGCCACGTGTAGTTTTAATCCTTTCAAAGAGACCTGGTAATTTGGAGGAACCAACGAGACCAGGAATACCCGGTTCTCGGTATAGAAGATCTCGTAGGACAAGTGCATCGTCCTCCATTGTTGGTACTTCAGGAACTTCTGGTGCATCTGACTCCTATGCTTTGACAACCAATACTACTGGAACTATAACTGCTACAGCAACCGCAACCGCAACTGCAAACGAAGTTGCTTCTAGTTCTTCTCCAATTAGTCGAAGATACGATAATCGTGGGAAACGTCCAATAGAAGGTTAG 957 43.68 MTEAKLLARVQHRNVVNLLGYCVHGSEKLLVYEYVMNESLDKLLFKSSRRGELDWKRRYDIIFGIARGLQYLHVDSHNVIIHRDIKASNILLDDKWVPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSAKADVFSFGVLVLELISGQRNSSFTSFMDAENLLDWAYKLYKKGRSLEIMDPTLASSADPDQVTMCIQIGLLCTQGDPHLRPTMPRVVLILSKRPGNLEEPTRPGIPGSRYRRSRRTSASSSIVGTSGTSGASDSYALTTNTTGTITATATATATANEVASSSSPISRRYDNRGKRPIEG 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 21059568 21064417 - MELO3C026424.2.1 Cme10g01593 340479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g01593 318 PANTHER RECEPTOR-LIKE KINASE 1 267 - -
Cme10g01593 318 MobiDBLite consensus disorder prediction 290 318 - -
Cme10g01593 318 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 267 - -
Cme10g01593 318 Gene3D Phosphorylase Kinase; domain 1 1 34 - -
Cme10g01593 318 ProSitePatterns Serine/Threonine protein kinases active-site signature. 80 92 IPR008271 GO:0004672|GO:0006468
Cme10g01593 318 MobiDBLite consensus disorder prediction 233 276 - -
Cme10g01593 318 ProSiteProfiles Protein kinase domain profile. 1 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme10g01593 318 MobiDBLite consensus disorder prediction 290 306 - -
Cme10g01593 318 SUPERFAMILY Protein kinase-like (PK-like) 2 247 IPR011009 -
Cme10g01593 318 Pfam Protein kinase domain 2 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme10g01593 318 SMART serkin_6 1 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme10g01593 318 Gene3D Transferase(Phosphotransferase) domain 1 35 238 - -
Cme10g01593 318 MobiDBLite consensus disorder prediction 251 276 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme10g01593 Cme-Chr10:21059568 Cme12g01873 Cme-Chr12:24926920 1.32E-90 dispersed
Cme10g01593 Cme-Chr10:21059568 Cme12g01459 Cme-Chr12:22307652 2.83E-31 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65216 PF00069 Pkinase 3.80E-39 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g01593 - - csv:101205738 547.354