Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g01737 ATGGAGGATGGAGATCGAATTGAAGAAGGTAGCTCCAGATTGCTGCAGGGTAGTAGCCTTACTGGCAGCAGTAATGATTACAGGTGGGTTGATGGAAGTGAAGTGGACTCCGAGTTGCCTCCATGGTCGATTTTTGAAGATAGGGAAAGCGTGGAAGCATCTGGATCTATCAGAAGGAGGTTGATTAAGAAGCCCAAGAGAGTTGATTCTTTTGATGTTGAAGCAATGGAGATTGCCGGTGCCAATCCTCACCATTTAAAGGATGTTTCCATTTGGCAAACTATTGCTATAGCCTTTCAAACACTTGGTGTTGTATATGGTGACATGGGTACAAGTCCATTATACGTTTTTGCTGATGTATTCACCAAGGTGCATATTGAGGAAGATGTTGATGTCTTGGGGGCTCTTTCCTTAGTGATTTACACAATTGCTCTTATTCCTTTGGCAAAATATGTTTTTGTTGTGCTCAGAGCCAATGACAATGGTGAAGGTGGGACATTTGCATTGTATTCGCTTATCTGTAGATATGCCAAAGTTAACTTGCTGCCAAACCGTCAGCCAGCTGATGAACATATCTCAAGTTTTAAGCTTAAACTACCCACTCCAGAGTTGGAAAGGGCCTTGAATATTAAAGAGATTCTGGAGAAAAGATCATCCTTGAAAACTCTTATACTGCTGTTGGTTCTGATGGGGACTTCAATGGTTATTGGGGATGGTATTTTGACTCCGGCAATATCAGTGATGTCTGCTGTGAGTGGTCTGCAGGGACAAATAAAGTCATTTGATACAAATGCTGTGGTTATTGTTTCAATCATCATTCTTGTGGCCTTGTTCAGCATACAGAAATTTGGAACTGGGAAAGTAGGATTTTTATTTGCTCCTGTGCTTGCTTTGTGGTTTTTTAGTCTGGGATCTATTGGAATTTACAATGTAGTGAAGTATGATCTCACCGTTGTAAGGGCTCTCAATCCCACTTACATTTATTTATTCTTCAAGAAAAATTCAAATAGTGCATGGTCAGCACTTGGTGGTTGTGTTTTGTGCGTAACAGGAGCTGAAGCAATGTTTGCTGATTTAGGCCATTTCACTGTGCCGGCCATACAGATTGCCTTCACATTTGTTGTTTTCCCCTGCCTTCTCTTGGCATACATGGGCCAGGCTGCGTACCTTATGAAACATCCAGATTCTGCCGCAAGAATATTTTATGATTCTGTGCCAGCAAGTCTTTTTTGGCCGGTCTTTGTGACAGCAACACTTGCTGCTATGATTGCAAGCCAAGCAATGATATCTGCAACCTTTTCTTGTGTCAAGCAATCTATGGCTCTTGGATGCTTTCCGAGAATGAAGATAGTTCATACCTCTAAGAGACGAATGGGTCAAATTTACATCCCTGTGATCAATTGGTTTCTGATGATAATGTGCATATTTGTCGTCGCAATATTTCAAAGGACTACGGACATCGCCAATGCTTATGGTATTGCAGAAGTTGGTGTGATGCTGGTGAGCACTGTCCTTGTGACTCTAGTAATGCTTCTAATCTGGCAGACAAATTTGTTTCTCGCGTTGTGTTTCCCACTTGTGTTTGGGTCGGTGGAATTTATCTACTTAACTGCAGTTCTATCAAAAATCAGAGAGGGTGGTTGGTTGCCACTTGCTTTTGCTTCTGTCTTCCTCTCTGTGATGTACACGTGGAACTATGGGAGTGTGTTGAAGTATCAAAGTGAGGTGAGAGACAAGATATCAACGGATTTCTTGCTTGAACTGGGTTCTACACTTGGAACTGTAAGAATTCCAGGAATTGGTCTTCTATACAATGATCTTGTCCAAGGCATTCCAGCAATTTTTGGGCAATTTCTTCTTACCCTTCCTGCCATCCACTCCACCATTGTGTTTGTGTGCATTAAATATGTTCCAATCCCCGTGGTTCCGCAAGAGGAAAGGTTTTTGTTTAGGAGGGTTGGCCCAAAAGATTACCATATGTTCCGTTGCATTGCGAGATATGGTTACAAGGATGTGCGAAAGGAAGATCACCATGCGTTTGAGCAACTTCTGATGGAAAGCCTCGAGAAGTTCTTAAGAAAGGAGTCTCAAGATCTTGCCCTTGAGAGCAATTTGAATGAGTTAGAATTTGATAATATTTCAGAGAGGTCGCAGGGTTTTCCATCTCCCCGTGTTGCTGATGTTAACGAGGAACTGAGAATTCCATTGATAGAACAAGAAAGAACTATGGGCCCAGAGGAAGCTTTTGGGGTTCAGTTGCCATCTAGCATTATGGCATCAGATGCTGATCCTAGTTTGGAGTATGAGCTATCAGCGCTTCGAGAAGCCATGGATTCAGGGTTTACGTACCTAATGGCACAAGGAGACGTCCGAGCAAAGAAAAACTCATTTTTTGTTAAGAAGCTTGTTATAAACTATTTCTATGCATTCTTAAGGAGGAATTGTAGGGGTGGTGCAGCAACAATGCGAGTTCCTCACATGAACATCATGCAAGTTGGTATGACTTACATGGTTTGA 2517 42.11 MEDGDRIEEGSSRLLQGSSLTGSSNDYRWVDGSEVDSELPPWSIFEDRESVEASGSIRRRLIKKPKRVDSFDVEAMEIAGANPHHLKDVSIWQTIAIAFQTLGVVYGDMGTSPLYVFADVFTKVHIEEDVDVLGALSLVIYTIALIPLAKYVFVVLRANDNGEGGTFALYSLICRYAKVNLLPNRQPADEHISSFKLKLPTPELERALNIKEILEKRSSLKTLILLLVLMGTSMVIGDGILTPAISVMSAVSGLQGQIKSFDTNAVVIVSIIILVALFSIQKFGTGKVGFLFAPVLALWFFSLGSIGIYNVVKYDLTVVRALNPTYIYLFFKKNSNSAWSALGGCVLCVTGAEAMFADLGHFTVPAIQIAFTFVVFPCLLLAYMGQAAYLMKHPDSAARIFYDSVPASLFWPVFVTATLAAMIASQAMISATFSCVKQSMALGCFPRMKIVHTSKRRMGQIYIPVINWFLMIMCIFVVAIFQRTTDIANAYGIAEVGVMLVSTVLVTLVMLLIWQTNLFLALCFPLVFGSVEFIYLTAVLSKIREGGWLPLAFASVFLSVMYTWNYGSVLKYQSEVRDKISTDFLLELGSTLGTVRIPGIGLLYNDLVQGIPAIFGQFLLTLPAIHSTIVFVCIKYVPIPVVPQEERFLFRRVGPKDYHMFRCIARYGYKDVRKEDHHAFEQLLMESLEKFLRKESQDLALESNLNELEFDNISERSQGFPSPRVADVNEELRIPLIEQERTMGPEEAFGVQLPSSIMASDADPSLEYELSALREAMDSGFTYLMAQGDVRAKKNSFFVKKLVINYFYAFLRRNCRGGAATMRVPHMNIMQVGMTYMV 838
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 24470807 24481272 - MELO3C026470.2.1 Cme10g01737 340623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g01737 838 Pfam K+ potassium transporter 98 671 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cme10g01737 838 MobiDBLite consensus disorder prediction 1 25 - -
Cme10g01737 838 PANTHER POTASSIUM TRANSPORTER 12-RELATED 11 838 - -
Cme10g01737 838 TIGRFAM kup: potassium uptake protein 97 838 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cme10g01737 838 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 11 838 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g01163 Cme-Chr7:15422628 Cme10g01737 Cme-Chr10:24470807 0 dispersed
Cme07g02155 Cme-Chr7:26036597 Cme10g01737 Cme-Chr10:24470807 0 dispersed
Cme10g01737 Cme-Chr10:24470807 Cme12g01537 Cme-Chr12:22839730 0 dispersed
Cme10g01737 Cme-Chr10:24470807 Cme04g01908 Cme-Chr4:26778147 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g01737 K03549 - csv:101202804 1587.78