Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme11g00028 | ATGGCGACCAGGCTTATGTTTGAAAACTCATGTGAAATTGGAGTTTTCTCCAAGCTCACTAATTCGTACTGTCTGGTTGCAATTGGTGGTTCTGAAGATTTCTATAGTACCTTTGAAGCTGAATTAGGTGCTGTCATTCCCGTGGTTAAAACATCTATTCATGGCACTCGCATTATTGGTCGTCTATGTGCTGGAAATAAAAATGGGCTTCTTCTACCACACACCACTACTGACCAAGAACTCCAGCACTTGAGGAACAGCCTACCTGACCAAGTTGTTGTTCAACGTATACAAGAGAGATTGTCTGCTTTGGGGAATACAATTGCTTGTAATGATCATGTCGCTCTCACACATACTGATCTTGATCGGGAAACTGAAGATCTCATTGCTGATGTTCTCGGAGTTGAGGTCTTTAGGCAAACAATAGCAGGCAACGACCTCGTGGGAAGCTACTGTAGCTTTACAAACAGGGGTGGCTTGGTAATATTAACCTCCTGTGCTCCTTAA | 507 | 43.2 | MATRLMFENSCEIGVFSKLTNSYCLVAIGGSEDFYSTFEAELGAVIPVVKTSIHGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRETEDLIADVLGVEVFRQTIAGNDLVGSYCSFTNRGGLVILTSCAP | 168 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 304729 | 308108 | + | MELO3C023215.2.1 | Cme11g00028 | 340691 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme11g00028 | 168 | Hamap | Translation initiation factor 6 [eif6]. | 1 | 168 | IPR002769 | GO:0042256|GO:0043022 | |
Cme11g00028 | 168 | Pfam | eIF-6 family | 4 | 161 | IPR002769 | GO:0042256|GO:0043022 | |
Cme11g00028 | 168 | SMART | eIF6neu2 | 3 | 167 | IPR002769 | GO:0042256|GO:0043022 | |
Cme11g00028 | 168 | SUPERFAMILY | Pentein | 1 | 161 | - | - | |
Cme11g00028 | 168 | Gene3D | - | 1 | 164 | - | - | |
Cme11g00028 | 168 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 6 | 1 | 161 | IPR002769 | GO:0042256|GO:0043022 | |
Cme11g00028 | 168 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 6 | 1 | 161 | - | - | |
Cme11g00028 | 168 | TIGRFAM | eIF-6: putative translation initiation factor eIF-6 | 4 | 161 | IPR002769 | GO:0042256|GO:0043022 | |
Cme11g00028 | 168 | CDD | IF6 | 2 | 161 | IPR002769 | GO:0042256|GO:0043022 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme02g00095 | Cme-Chr2:720962 | Cme11g00028 | Cme-Chr11:304729 | 5.33E-101 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme11g00028 | K03264 | - | csv:101212091 | 320.857 |