Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g00028 ATGGCGACCAGGCTTATGTTTGAAAACTCATGTGAAATTGGAGTTTTCTCCAAGCTCACTAATTCGTACTGTCTGGTTGCAATTGGTGGTTCTGAAGATTTCTATAGTACCTTTGAAGCTGAATTAGGTGCTGTCATTCCCGTGGTTAAAACATCTATTCATGGCACTCGCATTATTGGTCGTCTATGTGCTGGAAATAAAAATGGGCTTCTTCTACCACACACCACTACTGACCAAGAACTCCAGCACTTGAGGAACAGCCTACCTGACCAAGTTGTTGTTCAACGTATACAAGAGAGATTGTCTGCTTTGGGGAATACAATTGCTTGTAATGATCATGTCGCTCTCACACATACTGATCTTGATCGGGAAACTGAAGATCTCATTGCTGATGTTCTCGGAGTTGAGGTCTTTAGGCAAACAATAGCAGGCAACGACCTCGTGGGAAGCTACTGTAGCTTTACAAACAGGGGTGGCTTGGTAATATTAACCTCCTGTGCTCCTTAA 507 43.2 MATRLMFENSCEIGVFSKLTNSYCLVAIGGSEDFYSTFEAELGAVIPVVKTSIHGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRETEDLIADVLGVEVFRQTIAGNDLVGSYCSFTNRGGLVILTSCAP 168
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 304729 308108 + MELO3C023215.2.1 Cme11g00028 340691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g00028 168 Hamap Translation initiation factor 6 [eif6]. 1 168 IPR002769 GO:0042256|GO:0043022
Cme11g00028 168 Pfam eIF-6 family 4 161 IPR002769 GO:0042256|GO:0043022
Cme11g00028 168 SMART eIF6neu2 3 167 IPR002769 GO:0042256|GO:0043022
Cme11g00028 168 SUPERFAMILY Pentein 1 161 - -
Cme11g00028 168 Gene3D - 1 164 - -
Cme11g00028 168 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 1 161 IPR002769 GO:0042256|GO:0043022
Cme11g00028 168 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 1 161 - -
Cme11g00028 168 TIGRFAM eIF-6: putative translation initiation factor eIF-6 4 161 IPR002769 GO:0042256|GO:0043022
Cme11g00028 168 CDD IF6 2 161 IPR002769 GO:0042256|GO:0043022
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g00095 Cme-Chr2:720962 Cme11g00028 Cme-Chr11:304729 5.33E-101 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g00028 K03264 - csv:101212091 320.857