Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g00035 ATGGCAGTGGACGAAGAATCTCCGTTGAAGCTCTACTCATTCTGGGCCAGCACTTGTGCCCAACGTGTTCGAATTGCCCTCAACCTAAAAGGGCTAAACTTTCAGTACAAAGCTGTTGATTTATTGAAGGGAGAGCATTTGGCTCCTGAGTATCTAAAGCTCAATCCTGTTGGTTTTGTACCTACTCTTGTGGATGGGGATGTTGTTATTGCTGACTCTTTTGCTATAATAATGTATTTGGAGGAAAAGTATCCTCAGCGTCCTTTGCTGCCTACTGATCTTGTTAAAAGGGCTATTAATCACCAGGTTGCAAATATTGTTTCTTCAAGCATACAACCTCTTCAAAATTTAATTGTTGAGAAATACCTTGAGGAAAAATGTGGTACTGAGGAGAAACTTTCTTGGATTCACATGATCATTGGAAAAGGTTTTTTAGCACTAGAAAAGTTGCTGACAGTTGAAGCTGGAAAATTTGCTACTGGAGACCAAATTTATCTGGCAGACTTGTTTTTGGCACCTCAACTTCATCGGGCCATTGAAACATTCAATGTTGATATGGTATTGTATTTTAATTATTATTTCTATATATTAATGCTTAATTAA 603 37.81 MAVDEESPLKLYSFWASTCAQRVRIALNLKGLNFQYKAVDLLKGEHLAPEYLKLNPVGFVPTLVDGDVVIADSFAIIMYLEEKYPQRPLLPTDLVKRAINHQVANIVSSSIQPLQNLIVEKYLEEKCGTEEKLSWIHMIIGKGFLALEKLLTVEAGKFATGDQIYLADLFLAPQLHRAIETFNVDMVLYFNYYFYILMLN 200
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 343889 346448 + MELO3C023220.2.1 Cme11g00035 340698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g00035 200 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 7 88 IPR004045 -
Cme11g00035 200 TIGRFAM maiA: maleylacetoacetate isomerase 10 189 IPR005955 GO:0003824|GO:0005737|GO:0009072
Cme11g00035 200 CDD GST_N_Zeta 9 81 IPR034333 -
Cme11g00035 200 PANTHER GLUTATHIONE S-TRANSFERASE 2-LIKE ISOFORM X1 7 189 - -
Cme11g00035 200 PANTHER MALEYLACETOACETATE ISOMERASE 7 189 - -
Cme11g00035 200 SFLD Glutathione Transferase (cytosolic) 9 181 IPR040079 -
Cme11g00035 200 Gene3D Glutaredoxin 7 92 - -
Cme11g00035 200 SFLD Main (cytGST) 9 181 - -
Cme11g00035 200 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 93 200 IPR010987 -
Cme11g00035 200 Pfam Glutathione S-transferase, N-terminal domain 11 88 IPR004045 -
Cme11g00035 200 Gene3D - 93 193 - -
Cme11g00035 200 SUPERFAMILY GST C-terminal domain-like 88 186 IPR036282 -
Cme11g00035 200 SUPERFAMILY Thioredoxin-like 7 91 IPR036249 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme11g00035 Cme-Chr11:343889 Cme06g00426 Cme-Chr6:2717196 1.31E-13 dispersed
Cme11g00035 Cme-Chr11:343889 Cme11g00039 Cme-Chr11:362417 2.23E-96 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g00035 K01800 - csv:116401624 363.229