Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme11g00039 | ATGACCTCGCCGGCCGCAGCTTCTTCCTTGAAGCTTTACTCTTACTGGAGGAGCTCTTGTTCTCACCGTGTTCGAATTGCCCTCAACTTGAAACGTCTAAATTACGAGTACGAGGCTGTTAATCTACTCAAGGGAGAGCAATTCTCTCCCGAGTATGAGAAGCTTAATCCTATTGGTTATGTACCCACTCTTGTGGATGGTGATGTTGTTGTTGCCGACTCTTTTGCTATAATCATGTATTTGGAGGAGAAGTACCCTCAGAATCCTCTGTTGCCTCGTGACCTTGGTAAAAGAGCTATTAATTACCAGGCTGCAAATATCGTTTCTTCCAGCATACAGCCTCTTCAAAATCTAGCTGTTCTGAAGTACATTGAGGAAAAATCTGGTCCAGAAGAAAAACTTCGTTGGGTTCTACATCATATTGAAAAAGGTTTTACAGCACTTGAAAAGCTGCTAAAACCTCATGCTGGGAAATATGCTACTGGAGATGAAATCTCTCTGGCGGACTTGTTCTTGGCTCCTCAAATTCATGGCGCCATCAATAGATTCAATATTGACATGTCCAAATTTTCTCTATTAAGCAGGTTGAATGAGGAATACAATGGTATAGCAGCATTTCAAGATGCAGCCCCAGCGAAGCAGCCTGACGCTACTCCAACCTCTACTTAG | 669 | 43.05 | MTSPAAASSLKLYSYWRSSCSHRVRIALNLKRLNYEYEAVNLLKGEQFSPEYEKLNPIGYVPTLVDGDVVVADSFAIIMYLEEKYPQNPLLPRDLGKRAINYQAANIVSSSIQPLQNLAVLKYIEEKSGPEEKLRWVLHHIEKGFTALEKLLKPHAGKYATGDEISLADLFLAPQIHGAINRFNIDMSKFSLLSRLNEEYNGIAAFQDAAPAKQPDATPTST | 222 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 362417 | 366322 | + | MELO3C023224.2.1 | Cme11g00039 | 340702 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme11g00039 | 222 | CDD | GST_N_Zeta | 10 | 82 | IPR034333 | - | |
Cme11g00039 | 222 | Gene3D | Glutaredoxin | 7 | 92 | - | - | |
Cme11g00039 | 222 | PANTHER | MALEYLACETOACETATE ISOMERASE | 5 | 218 | - | - | |
Cme11g00039 | 222 | SFLD | Glutathione Transferase (cytosolic) | 10 | 190 | IPR040079 | - | |
Cme11g00039 | 222 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 94 | 219 | IPR010987 | - | |
Cme11g00039 | 222 | CDD | GST_C_Zeta | 97 | 214 | IPR034330 | - | |
Cme11g00039 | 222 | Pfam | Glutathione S-transferase, C-terminal domain | 123 | 195 | IPR004046 | - | |
Cme11g00039 | 222 | Gene3D | - | 93 | 220 | - | - | |
Cme11g00039 | 222 | SUPERFAMILY | GST C-terminal domain-like | 89 | 218 | IPR036282 | - | |
Cme11g00039 | 222 | PANTHER | GLUTATHIONE S-TRANSFERASE 2-LIKE ISOFORM X1 | 5 | 218 | - | - | |
Cme11g00039 | 222 | Pfam | Glutathione S-transferase, N-terminal domain | 12 | 89 | IPR004045 | - | |
Cme11g00039 | 222 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 8 | 89 | IPR004045 | - | |
Cme11g00039 | 222 | SUPERFAMILY | Thioredoxin-like | 7 | 93 | IPR036249 | - | |
Cme11g00039 | 222 | SFLD | Main (cytGST) | 10 | 190 | - | - | |
Cme11g00039 | 222 | TIGRFAM | maiA: maleylacetoacetate isomerase | 11 | 217 | IPR005955 | GO:0003824|GO:0005737|GO:0009072 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme06g00259 | Cme-Chr6:1581554 | Cme11g00039 | Cme-Chr11:362417 | 2.59E-55 | dispersed | |
Cme10g00854 | Cme-Chr10:5735347 | Cme11g00039 | Cme-Chr11:362417 | 3.11E-08 | dispersed | |
Cme11g00039 | Cme-Chr11:362417 | Cme06g00426 | Cme-Chr6:2717196 | 1.34E-13 | dispersed | |
Cme11g00035 | Cme-Chr11:343889 | Cme11g00039 | Cme-Chr11:362417 | 2.23E-96 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme11g00039 | K01800 | - | csv:101213302 | 421.009 |