Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cme11g00081 | ATGGGAGAAAACAAAAGATGTTTGATGGTAATCATTCTTATTCAAGCCATTAACGCCGGCATGTTTTTGCTTTCAAAGGCAGCATTCAACGCCGGAATGAATCATTATGTCTATATTTTTTATCGCCAGGTCGCCGCCACTGTCTTCCTTTCTCCCTTAGCCTTTTTTCGACGAAAAGTCGCCCCTCCTTTGACATTCTTTACCTTCTGCAAGATTTTTTGTCTCTCTTTGTTGGGGATAGCCATATGTTTAAATTTGTATGGAATTGCTCTCGTGTACACTTCAGCAACATTGGCTGCAGCAACTTCCAATTGTCTTCCTGTCATCACTTTCTTTGTTGCGCTTTTACTTAGGATGGAGGTGTTGAGGTTGAAATCAATAGCAGGAGCTGCAAAGATAGCAGGAATATTATTTTGCATTGGTGGTGTTGCGATTTTGGCATTTTACAACGGCCCCCAATTGAATTTGTTTAACAATCACCATCATCTCTTTCCTATCCATAAACCTAATAATAATCACCATTCTTCCTCTCTTCCATTGCCCAATTCTTGGTTGATGGGTTGCTTTTTGATGCTATCTTCCAATACCTTATGGAGTGTTTGGGTTGTTCTTCAGGCATTGGTATTGAAAAGCTATTCTTCCAAGCTTCAGTTGACAAATCTTCAATGTTTATTAAGTTCATTTCAATCATTTGGTATTGCCATTGCAATGGAAAGACAACCTCATAAATGGAAACTTGGTTGGAATCTTCAGCTTCTTGCAGTCATATATTGTGGCATGATGACCGCGGTTACGTTTTGTCTTCAAGCTTGGGTTATTGAGAAGAAAGGACCAGTTTATTTAGCCATGTCTACACCTTTGGCTCTTATCATCACAGCCTTCTTTTCTGCTATATTTCTTGGTGAGAGTATCACTCTTGGAAGTACTTTAGGAGGAATGTTGTTGGTGGGAGGGCTGTATTTTGTGCTATGGGGAAAGAACAAAGAGCAAACAATAAGTGAAACATTGAAAGAAGGTACCAAAGAAGGCAACGACATTGAAGAAGGGAAAGATATCACTAAAGTAGAACAATAA | 1074 | 39.2 | MGENKRCLMVIILIQAINAGMFLLSKAAFNAGMNHYVYIFYRQVAATVFLSPLAFFRRKVAPPLTFFTFCKIFCLSLLGIAICLNLYGIALVYTSATLAAATSNCLPVITFFVALLLRMEVLRLKSIAGAAKIAGILFCIGGVAILAFYNGPQLNLFNNHHHLFPIHKPNNNHHSSSLPLPNSWLMGCFLMLSSNTLWSVWVVLQALVLKSYSSKLQLTNLQCLLSSFQSFGIAIAMERQPHKWKLGWNLQLLAVIYCGMMTAVTFCLQAWVIEKKGPVYLAMSTPLALIITAFFSAIFLGESITLGSTLGGMLLVGGLYFVLWGKNKEQTISETLKEGTKEGNDIEEGKDITKVEQ | 357 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 651255 | 654868 | - | MELO3C023269.2.1 | Cme11g00081 | 340744 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cme11g00081 | 357 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 41 | 150 | - | - | |
| Cme11g00081 | 357 | MobiDBLite | consensus disorder prediction | 338 | 357 | - | - | |
| Cme11g00081 | 357 | Pfam | EamA-like transporter family | 8 | 134 | IPR000620 | GO:0016020|GO:0016021 | |
| Cme11g00081 | 357 | Pfam | EamA-like transporter family | 186 | 323 | IPR000620 | GO:0016020|GO:0016021 | |
| Cme11g00081 | 357 | PANTHER | WAT1-RELATED PROTEIN | 9 | 333 | IPR030184 | GO:0016021|GO:0022857 | |
| Cme11g00081 | 357 | PANTHER | WAT1-RELATED PROTEIN | 9 | 333 | - | - | |
| Cme11g00081 | 357 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 232 | 328 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cme08g01047 | Cme11g00081 | CCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cme06g01101 | Cme-Chr6:8306839 | Cme11g00081 | Cme-Chr11:651255 | 2.82E-14 | dispersed | |
| Cme11g00081 | Cme-Chr11:651255 | Cme04g02125 | Cme-Chr4:28571020 | 1.50E-72 | dispersed | |
| Cme11g00081 | Cme-Chr11:651255 | Cme11g00082 | Cme-Chr11:656276 | 0 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cme11g00081 | - | - | csv:101202788 | 633.254 |