Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g00082 ATGAAATATATGATGATGGATGAGAATAGAATAGCTTTCATGGCTGTGATTTTGATTCAAGCCATTTACGCCGGTATGTTTCTCGTCTCGAAGGCGGCTTTCGACGTTGGAATGAACAGCTATATTTTCGTTTTCTATCGTCAAGCCTTCGCTACCGCCTTCCTTTCTCCCATAGCCTTCTATTTTCAATGGAAAGATGCCCCACCCTTGACATTCTTCACCTTCTGCAAGATTTTTATGCTCTCTTTATTTGGGATAGCTCTATGTTTAAATCTTTATGGGATTGCTCTGGTGTATACATCAGCAACATTGGCTGCAGCAACTACAAATTCTCTTCCTGTCACCACCTTCTTTGTTGCCCTCTTACTTAGGATGGAGGTGTTGAGGTTGAAGTCAATAGCAGGAATTGGAAAGCTAGCAGGAATATTATTTTGCATGGGTGGTGTTGGAGTTTTGGCATTTTACAAAGGGCCCCAATTGAATTTTTTCAACCATCATCATCTCTTTTCCATCCATAACCCTAATCACCATTCTTCTCCTGTTGCATTACCCAATACTTGGTTGAAGGGTTGCTTTTTGATGCTATCTGCCAATACCTTATGGGGTATTTGGATTGTTCTTCAGGCCTTTGTATTGAAAAGCTATCCTTCAAAGCTTATGTTGACAAATCTTCAATGTTTATTAAGTTCATTTCAATCCTTTGCTATTGCTATTGCAATGGAAAGAGACCCTCAACAATGGAAACTTGGCTGGAATCTTAGGCTTCTCTCAGTGGCATATTGTGGTATCGTGGTGACCGCAGTTACCTACTGTCTTCAAGCTTGGGTTATTGAGAAGAAAGGACCAGTTTATCTAGCCATGTCTACACCTATCGCTCTTGTCATTACAATCTTCTTCTCTGCTGTTTTTCTTGGAGAGAGTATCACTCTTGGAAGTATCTTAGGAGGATTTTTATTGGTGGGAGGTTTGTATTTTGTGCTATGGGGAAAGAGCAAAGAGCAGAAAATAAGTGAAGGATTGAAAGAAGGTACCAAAGAATGCAACATGGAAGAAGGGAAAGATAGCACTAAGTTACCCAATGAAAATCCAACATCTTCTGTGGAAAATGTTTGA 1113 39.98 MKYMMMDENRIAFMAVILIQAIYAGMFLVSKAAFDVGMNSYIFVFYRQAFATAFLSPIAFYFQWKDAPPLTFFTFCKIFMLSLFGIALCLNLYGIALVYTSATLAAATTNSLPVTTFFVALLLRMEVLRLKSIAGIGKLAGILFCMGGVGVLAFYKGPQLNFFNHHHLFSIHNPNHHSSPVALPNTWLKGCFLMLSANTLWGIWIVLQAFVLKSYPSKLMLTNLQCLLSSFQSFAIAIAMERDPQQWKLGWNLRLLSVAYCGIVVTAVTYCLQAWVIEKKGPVYLAMSTPIALVITIFFSAVFLGESITLGSILGGFLLVGGLYFVLWGKSKEQKISEGLKEGTKECNMEEGKDSTKLPNENPTSSVENV 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 656276 662551 - MELO3C023270.2.1 Cme11g00082 340745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g00082 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 332 - -
Cme11g00082 370 MobiDBLite consensus disorder prediction 340 370 - -
Cme11g00082 370 PANTHER WAT1-RELATED PROTEIN 14 337 IPR030184 GO:0016021|GO:0022857
Cme11g00082 370 Pfam EamA-like transporter family 14 137 IPR000620 GO:0016020|GO:0016021
Cme11g00082 370 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020|GO:0016021
Cme11g00082 370 MobiDBLite consensus disorder prediction 340 357 - -
Cme11g00082 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 155 - -
Cme11g00082 370 PANTHER WAT1-RELATED PROTEIN 14 337 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g00317 Cme-Chr3:4019876 Cme11g00082 Cme-Chr11:656276 2.14E-92 dispersed
Cme08g01057 Cme-Chr8:6893790 Cme11g00082 Cme-Chr11:656276 9.39E-85 dispersed
Cme08g01059 Cme-Chr8:6911230 Cme11g00082 Cme-Chr11:656276 1.12E-85 dispersed
Cme11g00082 Cme-Chr11:656276 Cme04g02125 Cme-Chr4:28571020 1.67E-74 dispersed
Cme11g00081 Cme-Chr11:651255 Cme11g00082 Cme-Chr11:656276 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g00082 - - csv:101203024 691.419