Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme11g00083 | ATGGAGAAATCACCAGGAAATGAACTTACACACAAGGCTTTTGGTTGGGCTGCTCGAGATTCATCTGGGGAAAATGGTGATGATGATGTCTCTATCAAAGTTCTCTACTGTGGGGTTTGCCACTCTGATTTGCATATGCTCAAGAATGACTGGGGTTCCACAGATTATCCTATAGTACCTGGGCATGAGATTGTTGGTGTTGTGACTTCTGTTGGAAAAAATGTGAAGAGATTCAAAGCAGGAGACGAAGTCGGTGTCGGTGTCATAGTTGGATCTTGTAGAAATTGTGAAAATTGTAAACAAGACTTGGAGAGTTACTGTCCCAAGATGGAATATACTTACAATTCTCCTGGAGTTGATGGAACGAAGAATTACGGTGGTTATTCCGATAAGATCGTTGTCGATCAACATTTTGTTGTTAGATTTCCTAAAAACTTAGCTCTTGATGCTGGGGCTCCACTCCTATGTGCTGGGATAACAGTCTATAGCCCAATGAAACATTTTGGAATGACTGAACCTGGTAAGCATTTGGGTGTGGCTGGACTTGGTGGGCTTGGTCATGTTGCTGTTAAGTTTGGTAAGGCTTTTGGATTGAAAGTTACTGTCATTAGTACCTCTTCTAGGAAGAAGGAAGAAGCAATTGACAGGCTCGGTGCTGACGCTTTCGTTGTTTCGACTGATCCCGAACAATTGAAGGCTGCCATGGGAACTATGGATTACATTTTGGACACAATATCAGCTGTTCATCCTCTTGATCCGTTGATTAGTCTGCTAAACCTCAATGGAAAACTCGTTGCTGTCGGCTTACCTAACAAGCCAGTTGAACTATCGATCGGGATTCTTGCTTCTGGTAGGAGGGTGGTAGCCGGAAGCAACTTTGGAGGACTGAAAGAGACACAAGAAATGTTAGATTTCTGTGGAAAACACAATATTACAGCAGAAATTGAGCTCATTAAGATGGATGACATTAACTCAGCCATGGAAAGGCTTGCGAAAGCTGATGTTAAATATCGGTTTGTGATCGACATCGAAAACTCTTTCAAATAG | 1047 | 42.31 | MEKSPGNELTHKAFGWAARDSSGENGDDDVSIKVLYCGVCHSDLHMLKNDWGSTDYPIVPGHEIVGVVTSVGKNVKRFKAGDEVGVGVIVGSCRNCENCKQDLESYCPKMEYTYNSPGVDGTKNYGGYSDKIVVDQHFVVRFPKNLALDAGAPLLCAGITVYSPMKHFGMTEPGKHLGVAGLGGLGHVAVKFGKAFGLKVTVISTSSRKKEEAIDRLGADAFVVSTDPEQLKAAMGTMDYILDTISAVHPLDPLISLLNLNGKLVAVGLPNKPVELSIGILASGRRVVAGSNFGGLKETQEMLDFCGKHNITAEIELIKMDDINSAMERLAKADVKYRFVIDIENSFK | 348 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 693602 | 695918 | + | MELO3C034560.2.1 | Cme11g00083 | 340746 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme11g00083 | 348 | Pfam | Zinc-binding dehydrogenase | 184 | 305 | IPR013149 | - | |
Cme11g00083 | 348 | ProSitePatterns | Zinc-containing alcohol dehydrogenases signature. | 61 | 75 | IPR002328 | GO:0008270|GO:0016491 | |
Cme11g00083 | 348 | PANTHER | ALDEHYDE REDUCTASE | 7 | 346 | - | - | |
Cme11g00083 | 348 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 148 | 311 | IPR036291 | - | |
Cme11g00083 | 348 | Gene3D | - | 24 | 343 | - | - | |
Cme11g00083 | 348 | SMART | PKS_ER_names_mod | 9 | 341 | IPR020843 | GO:0016491 | |
Cme11g00083 | 348 | SUPERFAMILY | GroES-like | 24 | 175 | IPR011032 | - | |
Cme11g00083 | 348 | Gene3D | - | 157 | 313 | - | - | |
Cme11g00083 | 348 | CDD | CAD1 | 14 | 342 | - | - | |
Cme11g00083 | 348 | Pfam | Alcohol dehydrogenase GroES-like domain | 28 | 141 | IPR013154 | - | |
Cme11g00083 | 348 | PANTHER | CINNAMYL ALCOHOL DEHYDROGENASE 8 | 7 | 346 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme06g01378 | Cme-Chr6:12016238 | Cme11g00083 | Cme-Chr11:693602 | 7.44E-115 | dispersed | |
Cme11g00083 | Cme-Chr11:693602 | Cme09g01886 | Cme-Chr9:23008379 | 4.08E-16 | dispersed | |
Cme11g00083 | Cme-Chr11:693602 | Cme11g00085 | Cme-Chr11:721295 | 2.88E-176 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme11g00083 | K00083 | - | csv:101205228 | 666.381 |