Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme11g00085 | ATGGCAAAATCACCAGAAAACGAACATCCAATCAAGACTCTGGGATGGGGTGCTCGAGATTCATCTGGGTTAATCTCTCCTTTCCCTTTATCTCGAAGGGAAAATGGTGATGAAGATGTCAGTATCAAAATCCTTTACTGTGGTGTTTGCCATTCTGATCTACATACAGCCAAGAATGAATGGGGTAACACAAATTATCCAGTTGTCCCAGGGCATGAGATTGTTGGTGTTGTGACCTCTGTTGGGAATAATGTGAAGAAATTCAAAGCAGGCGACCAAGTCGGTGTCGGTGTGATAGTTGAATGTTGCAAAAGTTGTGAAAATTGTGAAGAGGACAGGGAGAATTACTGCCCCAAATTGGTATATACTTACAATGCACATTTACATGATGGATCGAAGACATATGGGGGATATTCTGATAAGATTGTCGTCGATCAGCATTGCGTGTTTCGAATTCCCGACAGTTTACCCCTGGCTGGTGCAGCTCCACTTCTATGTGCTGGAATCACAGTTTATAGCCCCATGAAATACTATGGAATGACTGAATCTGGTAAGCATTTGGGTGTGGTTGGTCTTGGTGGGCTTGGTCATGTTGCTGTTAAGATTGCTAAGGCATTTGGGTTGAAAGTTACTGTCATAAGTACTTCTCCAAGAAAGAAGGAGGAATCTATTAGCAAGCTTGGTGCCGATTCTTTCCTTGTTTCAACTGATCCTGAACAAATGAAGGCTGCAACAGAGACAATGGATTACATTATAGACACGGTATCTGCTGTCCATGCTCTCGATCCATTGCTTAGTCTTCTAAAGCTGAATGGAAAGTTGATCACTGTGGGTTTACCTGACAAGCCCCTAGAGCTGCCAATTTCTTCTCTAGTTAACGTTAGGAGGATGGTTGGTGGAAGCAACTTTGGAGGGATGAAAGAGACACAAGAGATGTTGGATTTCTGTGCCGAGCACAACATTGTAGCAGACATTGAGCTCATTAAGATGAATGACATAAACAATGCCATGGAAAGACTTGCCAAATCTGATGTTCGATACCGGTTCGTGATCGACATTGCAAACTCCTTGAAATAA | 1077 | 42.71 | MAKSPENEHPIKTLGWGARDSSGLISPFPLSRRENGDEDVSIKILYCGVCHSDLHTAKNEWGNTNYPVVPGHEIVGVVTSVGNNVKKFKAGDQVGVGVIVECCKSCENCEEDRENYCPKLVYTYNAHLHDGSKTYGGYSDKIVVDQHCVFRIPDSLPLAGAAPLLCAGITVYSPMKYYGMTESGKHLGVVGLGGLGHVAVKIAKAFGLKVTVISTSPRKKEESISKLGADSFLVSTDPEQMKAATETMDYIIDTVSAVHALDPLLSLLKLNGKLITVGLPDKPLELPISSLVNVRRMVGGSNFGGMKETQEMLDFCAEHNIVADIELIKMNDINNAMERLAKSDVRYRFVIDIANSLK | 358 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 721295 | 724529 | + | MELO3C023272.2.1 | Cme11g00085 | 340748 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme11g00085 | 358 | Pfam | Zinc-binding dehydrogenase | 194 | 317 | IPR013149 | - | |
Cme11g00085 | 358 | SUPERFAMILY | GroES-like | 25 | 185 | IPR011032 | - | |
Cme11g00085 | 358 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 156 | 321 | IPR036291 | - | |
Cme11g00085 | 358 | Gene3D | - | 167 | 323 | - | - | |
Cme11g00085 | 358 | ProSitePatterns | Zinc-containing alcohol dehydrogenases signature. | 71 | 85 | IPR002328 | GO:0008270|GO:0016491 | |
Cme11g00085 | 358 | Gene3D | - | 16 | 353 | - | - | |
Cme11g00085 | 358 | PANTHER | CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED | 12 | 357 | - | - | |
Cme11g00085 | 358 | PANTHER | ALDEHYDE REDUCTASE | 12 | 357 | - | - | |
Cme11g00085 | 358 | Pfam | Alcohol dehydrogenase GroES-like domain | 38 | 151 | IPR013154 | - | |
Cme11g00085 | 358 | SMART | PKS_ER_names_mod | 17 | 351 | IPR020843 | GO:0016491 | |
Cme11g00085 | 358 | CDD | CAD1 | 15 | 352 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme08g00714 | Cme-Chr8:4754121 | Cme11g00085 | Cme-Chr11:721295 | 1.27E-164 | dispersed | |
Cme09g01902 | Cme-Chr9:23162589 | Cme11g00085 | Cme-Chr11:721295 | 8.23E-114 | dispersed | |
Cme11g00085 | Cme-Chr11:721295 | Cme09g01886 | Cme-Chr9:23008379 | 7.86E-20 | dispersed | |
Cme11g00083 | Cme-Chr11:693602 | Cme11g00085 | Cme-Chr11:721295 | 2.88E-176 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme11g00085 | K00083 | - | csv:101206562 | 630.943 |