Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme11g00154 | ATGGCAACTTACTTCTCTAGTTCGAATAACGAAAGGGACACTACTCCCATCCTCTATTCAAGGGGATCTTTGCTCGGTTCATATGAAGAAACAACAATTCTTCCACGAAATATGATGATGCATGTAAATTCTGGGACATACATGGATTCGTTACCATCACAGGCACAAAATGGTTGTGGTCAGATCACGTCGGTTGGAGCAGCAGGAACTACCCAACAGCAGCAAGAGTTTTTATCAAATCTTGGTGGCTCACAAATTGCTGAGCATGATTTCAATACATGGAGAGAGGACCGGAGTGAAATGCTTGGCGCGAACTTGATGCGTGGCCCTACCAATGTTCTTCATGGTGGGCAGAATTTGCAGGGTCAGGGTTTATCCCTTACTCTCAGTACACAAATCCCTTCAATCCCCTACAGAAATTCGGATATGGGTTTAACTTCATTCCTGAGTCCTAATCCGACTAATTCAGGTGAGGATGGCTGCAGAAATGGTGCATCTAGAGACGAACAGTTGAGAAATGGAGAAAACTTGCCACCTAATTTTCAAGAATTGGCTAAGGGTGAAATATCTCAATACAGCATGTCTACTATTGCAAGAACTATGCCCAATTCAAAGTACCTCAAGGCAGCTCAACAACTGCTTGATGAAGTTGTTAATGTCAGGAAAGCTTTGAAGCGGCCTAATAATGAGAGAAACCAGAGTTCACCTGAGCATGAAACTAAAAGTGCAAAGAACGGTGACGCAGGAACCAAAAATGACAGTTCGATGCTCACTGCAAGTGGAACATCTTCAAACCCTCAAGAAACTGGGAGCAATTCAACATGTGAGCTCTCTCATGCCGAAAAGCAAGATTTGCAGAACAAGTTGACTAAGCTTTTATACATGCTGGATGAGGTTGATAGAAGGTACAATCAGTACTATCATCAGATGCAGATTGTGGTGTCGTCCTTTGATGTGATAGCTGGATGTGGGGCATCTAAGCCATATACTGCACTTGCACTCCAGACCATATCCCGTCATTTTCGGTGCTTGCGTGATGCAATAGCTGGTCAAGTCAGAGCTACCCGTAAAAGCCTGGGAGAGCATGAGAATTCTGGAAGTGACAAGGGAGTTGGAATCACTCGTCTTCGATATGTGGACCAGCAGTTAAGGCAACAGAGGGCACTTCAGCAGCTTGGTATGATACAGCAGCATGCATGGAGGCCTCAAAGAGGGTTGCCTGAGAACTCTGTTTCAATTCTCCGTGCTTGGCTGTTCGAGCATTTCCTTCATCCGTATCCAAAGGATTCTGATAAGATCATGCTGGCAAGGCAGACAGGCTTGACTAGAAGTCAGGTTTCTAATTGGTTTATCAATGCGCGTGTACGTCTTTGGAAACCTATGGTAGAGGAGATGTACAAGGAAGAAATAGGCAGCGTAGACATGGACTCTATATCATCATCTGAAAATGCTGGGAAGGCAACAAAAGGAGATAACAAGACCTTTGAGGATGATAAAGAGGAGGATCTACAACAAAGTGCAAGTTCAACAGCCACCGAAAGATGTAGCGCTGGAGATATTATTGACTTAAAATCTGATCAAGTCTCGAATCTCGGAAATTCATGTTCCAACAGAGTAGCTAGTTTCCAAAATGGAGCTCACATTGAAGCTCGAAACGAGCTGGCAAAGCCGAACGATGAGTTAAGGCCTAATGTAAATAACTCTAGTTTCTTTCCTGATGCAATTGTCCACTCTCAGGGTGAGAGTGACAGATTTATGGCCGCTGCTGCCGCCTATCACATGTCTGAATTGGGAAGATTTGGAACGGTTGGCGGGGTGTCGCTTACGCTGGGTTTGCAGCATTGTGAGGGTGGTGGCCTACCATTGCCTGCTGGGACACATCATGGTTTTGCAACCATGAGAGGAGACGATATGTACAATGCTGCAGCGTCTTCCCTTGGGGAAACGGTTCATTTTGAATGCGTAAATAGTGGGAATCCGCAACCGAGGTTTGGCCCTTCCCATCTTTATCATGATTTTGTTGTGTAA | 2028 | 44.87 | MATYFSSSNNERDTTPILYSRGSLLGSYEETTILPRNMMMHVNSGTYMDSLPSQAQNGCGQITSVGAAGTTQQQQEFLSNLGGSQIAEHDFNTWREDRSEMLGANLMRGPTNVLHGGQNLQGQGLSLTLSTQIPSIPYRNSDMGLTSFLSPNPTNSGEDGCRNGASRDEQLRNGENLPPNFQELAKGEISQYSMSTIARTMPNSKYLKAAQQLLDEVVNVRKALKRPNNERNQSSPEHETKSAKNGDAGTKNDSSMLTASGTSSNPQETGSNSTCELSHAEKQDLQNKLTKLLYMLDEVDRRYNQYYHQMQIVVSSFDVIAGCGASKPYTALALQTISRHFRCLRDAIAGQVRATRKSLGEHENSGSDKGVGITRLRYVDQQLRQQRALQQLGMIQQHAWRPQRGLPENSVSILRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQVSNWFINARVRLWKPMVEEMYKEEIGSVDMDSISSSENAGKATKGDNKTFEDDKEEDLQQSASSTATERCSAGDIIDLKSDQVSNLGNSCSNRVASFQNGAHIEARNELAKPNDELRPNVNNSSFFPDAIVHSQGESDRFMAAAAAYHMSELGRFGTVGGVSLTLGLQHCEGGGLPLPAGTHHGFATMRGDDMYNAAASSLGETVHFECVNSGNPQPRFGPSHLYHDFVV | 675 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 1651284 | 1656057 | - | MELO3C023333.2.1 | Cme11g00154 | 340817 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme11g00154 | 675 | MobiDBLite | consensus disorder prediction | 247 | 279 | - | - | |
Cme11g00154 | 675 | MobiDBLite | consensus disorder prediction | 225 | 246 | - | - | |
Cme11g00154 | 675 | SMART | prehox3 | 195 | 350 | IPR006563 | - | |
Cme11g00154 | 675 | ProSiteProfiles | 'Homeobox' domain profile. | 397 | 460 | IPR001356 | GO:0003677 | |
Cme11g00154 | 675 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 70 | 623 | - | - | |
Cme11g00154 | 675 | SUPERFAMILY | Homeodomain-like | 401 | 468 | IPR009057 | - | |
Cme11g00154 | 675 | PANTHER | BEL1-LIKE HOMEODOMAIN PROTEIN 10 | 70 | 623 | - | - | |
Cme11g00154 | 675 | Coils | Coil | 282 | 302 | - | - | |
Cme11g00154 | 675 | MobiDBLite | consensus disorder prediction | 144 | 161 | - | - | |
Cme11g00154 | 675 | Gene3D | - | 395 | 473 | - | - | |
Cme11g00154 | 675 | Pfam | Homeobox KN domain | 417 | 456 | IPR008422 | GO:0003677|GO:0006355 | |
Cme11g00154 | 675 | MobiDBLite | consensus disorder prediction | 225 | 279 | - | - | |
Cme11g00154 | 675 | MobiDBLite | consensus disorder prediction | 144 | 181 | - | - | |
Cme11g00154 | 675 | MobiDBLite | consensus disorder prediction | 477 | 511 | - | - | |
Cme11g00154 | 675 | SMART | HOX_1 | 400 | 464 | IPR001356 | GO:0003677 | |
Cme11g00154 | 675 | Pfam | Associated with HOX | 202 | 349 | IPR006563 | - | |
Cme11g00154 | 675 | MobiDBLite | consensus disorder prediction | 489 | 504 | - | - | |
Cme11g00154 | 675 | CDD | homeodomain | 400 | 461 | IPR001356 | GO:0003677 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme01g02615 | Cme-Chr1:33782094 | Cme11g00154 | Cme-Chr11:1651284 | 1.67E-101 | dispersed | |
Cme05g00241 | Cme-Chr5:1763777 | Cme11g00154 | Cme-Chr11:1651284 | 6.26E-94 | dispersed | |
Cme11g00154 | Cme-Chr11:1651284 | Cme11g00313 | Cme-Chr11:3310166 | 3.31E-85 | dispersed | |
Cme11g00154 | Cme-Chr11:1651284 | Cme04g02323 | Cme-Chr4:30173085 | 4.14E-108 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
42128 | PF07526 | POX | 2.30E-51 | No_clan | Cme | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme11g00154 | - | - | csv:101205137 | 1304.66 |