Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme11g00313 | ATGTCACAACAAGACTACCAACAAGCGGCGGCGGCGGCGGCCGCGGCAGCAGCAGCAGCAGCGGCAGGTTTCTTCACGCCGTTTTCCAATGGCTTTGATAGATCTTCCACAACTCATCACCAAGACTCACAACAACATTACCAACACATAGCTCACCAGATCCGTAAAGAGAAACTCCGCCTCCAAGGCGGCTACGACGCGCCGCCGCATCCACCGTCGTTAGTTGGAATCGACGATGACGACGACAACAACGACGACCAATCCGCTGTCCATCACGTTTACGACTCCACCGGAATTTTATCCGAAATGTTCAATTTTCCACCACAACCGCCACCGCCACCTCCGCAGACTGATTGGTACAGTAACAGACAAACAATCAACGCCACGGATTCGGCTGTCGCCATGCAGCTTTTTCTAATGAACCCGAATCCTCGGTCGCCATCTCCGCCACCACCGTCGTCGTCGACACTCCACATGCTTCTTCCAAACCCTTCTTCAGGAGGGTCTTATGGACAATTCACATGGGGGGTGGTGCCGGAGCAAGAAACAAATAATGACCATTCTTCATCAAACCCTAATGAAGGTCGTCTTTCATTGTCATTGTCATCTTCTTTGGAAGCTGCAAAAGCTGAGGAATTGAGAATGGGCGACAGCACCAATGGGTTGCTTTATCATCACCACCATCACCCTCATGTCGGAATTGGGTCCTCCAATCCATTGGGAGTTGTCAACTTATTGAGAAATTCAAAGTACATTAAAGCTACTCAAGAATTATTAGAGGAATTTTGTAGCGTTGGAAGAGGTCAATTTAAGAAGAACAATCATCATAATAAATCAAATTTGCCCTCCAATTCTAACTCCCATGGTGGCGGTGGAGGCGACGGTGCCGGAGTTTCTTCATCTTCAACAAAGGATCATCAACCATCTTTGTCAGCAACTGATAGGATTGAACATCAAAGGAGAAAGGTCAAATTGTTATCTATGCTTGATGAGGTTGATCGAAGATATAATCATTATTGTGAGCAAATGCAAATGGTGGTGAATTCATTCGACGAGGTGATGGGATTCAGGGCAGCAGTGCCATACACGGCGTTGGCGCAGAAGGCAATGTCGAGGCATTTTCGATGTTTAAAGGATGCAATATCATCACAGCTGAGGCATAGTTGCGAGATGTTGGGGGAGAAAGATGGGGGAGTAACTGGTAGAGCTTCGGGAATAACAAAGGGAGAGACTCCTAGACTTAAGCTCTTGGAGCAAAGCCTTAGGCAGCAACGAGCGTTCCATCAAATGGGTATTATGGAACAAGAAGCTTGGCGTCCTCAACGCGGCTTGCCTGAACGCTCTGTCAATATCTTACGAGCTTGGCTCTTCGAGCATTTCCTTCATCCGTATCCTAGTGATGCTGATAAACATTTGTTAGCTAGACAGACTGGTTTGTCAAGAAATCAAGTATCAAATTGGTTCATTAATGCCAGGGTTCGTTTGTGGAAACCCATGGTAGAAGAAATGTACCAACAAGAAGCCAAAGATGATGACGATGACGACGATCATAATAACAACAACAATAGTAGTAGTAATAATAATAATAATAATAACAACAATAATAATACCACCGATGATGAAGAAGACACACAAACCAACAACCATCAACAAATAATGAATCCCCTTTCACAAACTCCAACGCCACAGCCACAGCCACAGCCGCAGCCGCAGCCTCATCTTCCTCCTTCGTCCTCCGCCGCGGTGGGGCAGTCGTATCCGGCGAACAATTATGAGACAGAGCTGCAGGACACGTGTCGGCGTGTCAGCGTTCTGGCTGCACCTGATCTTCAATTCGGGACCACAAATGGTGCTGCCACGTCTGACATGGAAGGGCCCACCACTCTCATAAGGTTCGGGACCACCATCGCCGCCACCACCACCACCACCGGTGACGTGTCGCTCACACTAGGTTTACGCCACGCCGGAAATATCCCCGATCAATCCTCACCCTTCACCCTCAGATCCGAGTTTGGAGGCTGTTAA | 2025 | 48.0 | MSQQDYQQAAAAAAAAAAAAAAGFFTPFSNGFDRSSTTHHQDSQQHYQHIAHQIRKEKLRLQGGYDAPPHPPSLVGIDDDDDNNDDQSAVHHVYDSTGILSEMFNFPPQPPPPPPQTDWYSNRQTINATDSAVAMQLFLMNPNPRSPSPPPPSSSTLHMLLPNPSSGGSYGQFTWGVVPEQETNNDHSSSNPNEGRLSLSLSSSLEAAKAEELRMGDSTNGLLYHHHHHPHVGIGSSNPLGVVNLLRNSKYIKATQELLEEFCSVGRGQFKKNNHHNKSNLPSNSNSHGGGGGDGAGVSSSSTKDHQPSLSATDRIEHQRRKVKLLSMLDEVDRRYNHYCEQMQMVVNSFDEVMGFRAAVPYTALAQKAMSRHFRCLKDAISSQLRHSCEMLGEKDGGVTGRASGITKGETPRLKLLEQSLRQQRAFHQMGIMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEEMYQQEAKDDDDDDDHNNNNNSSSNNNNNNNNNNNTTDDEEDTQTNNHQQIMNPLSQTPTPQPQPQPQPQPHLPPSSSAAVGQSYPANNYETELQDTCRRVSVLAAPDLQFGTTNGAATSDMEGPTTLIRFGTTIAATTTTTGDVSLTLGLRHAGNIPDQSSPFTLRSEFGGC | 674 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3310166 | 3316349 | - | MELO3C020878.2.1 | Cme11g00313 | 340976 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme11g00313 | 674 | CDD | homeodomain | 438 | 499 | IPR001356 | GO:0003677 | |
Cme11g00313 | 674 | MobiDBLite | consensus disorder prediction | 559 | 575 | - | - | |
Cme11g00313 | 674 | MobiDBLite | consensus disorder prediction | 507 | 585 | - | - | |
Cme11g00313 | 674 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 79 | 661 | - | - | |
Cme11g00313 | 674 | MobiDBLite | consensus disorder prediction | 62 | 89 | - | - | |
Cme11g00313 | 674 | SMART | prehox3 | 240 | 383 | IPR006563 | - | |
Cme11g00313 | 674 | Gene3D | - | 441 | 503 | - | - | |
Cme11g00313 | 674 | MobiDBLite | consensus disorder prediction | 275 | 309 | - | - | |
Cme11g00313 | 674 | SMART | HOX_1 | 438 | 502 | IPR001356 | GO:0003677 | |
Cme11g00313 | 674 | Pfam | Associated with HOX | 246 | 382 | IPR006563 | - | |
Cme11g00313 | 674 | MobiDBLite | consensus disorder prediction | 273 | 317 | - | - | |
Cme11g00313 | 674 | MobiDBLite | consensus disorder prediction | 520 | 558 | - | - | |
Cme11g00313 | 674 | MobiDBLite | consensus disorder prediction | 143 | 157 | - | - | |
Cme11g00313 | 674 | MobiDBLite | consensus disorder prediction | 101 | 121 | - | - | |
Cme11g00313 | 674 | PANTHER | BEL1-LIKE HOMEODOMAIN PROTEIN 2 | 79 | 661 | - | - | |
Cme11g00313 | 674 | Pfam | Homeobox KN domain | 455 | 494 | IPR008422 | GO:0003677|GO:0006355 | |
Cme11g00313 | 674 | SUPERFAMILY | Homeodomain-like | 439 | 505 | IPR009057 | - | |
Cme11g00313 | 674 | ProSiteProfiles | 'Homeobox' domain profile. | 435 | 498 | IPR001356 | GO:0003677 | |
Cme11g00313 | 674 | MobiDBLite | consensus disorder prediction | 140 | 163 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme08g00510 | Cme-Chr8:3146484 | Cme11g00313 | Cme-Chr11:3310166 | 2.94E-161 | dispersed | |
Cme09g01786 | Cme-Chr9:22302206 | Cme11g00313 | Cme-Chr11:3310166 | 1.51E-96 | dispersed | |
Cme11g00154 | Cme-Chr11:1651284 | Cme11g00313 | Cme-Chr11:3310166 | 3.31E-85 | dispersed | |
Cme11g00313 | Cme-Chr11:3310166 | Cme12g00421 | Cme-Chr12:6337581 | 6.92E-78 | dispersed | |
Cme11g00313 | Cme-Chr11:3310166 | Cme04g02323 | Cme-Chr4:30173085 | 1.84E-83 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
42145 | PF07526 | POX | 4.70E-52 | No_clan | Cme | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme11g00313 | - | - | csv:101212977 | 1056.59 |