Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme11g00336 | ATGGAGTGGGTTCGAGGGGATCAACTCGGCCGTGGAAATTTTGCTACAATCAGTTTAGCAAAATTAACTAAAGGGTTCGATCAGTTCCCGCCATTAATGGCGGTCAAATCCTCTGTTTCTTCTCTATCCTCTGTTTCACTCAAGAACGAGAAGCAAATTCTTGATCGAATTGGGGTTTGCCCACAGATTATTACTTGTTATGGCGATGGATTCAGTGTTGAAAAAGATGGGGATAAGTATTATAATTTGTTCTTGGAGTATGCTAATGGCGGAAGTCTTGCGGATGTTGTGAGAACCCATGGCGGTGGGTTGTCGGAATTTGATGTTCGAAGGTATACGAGAGCGATTCTTTATGGCCTACGGCATGTTCATGGCAATGGGTTTGTTCATTGTGATTTAAAGCTTTCGAATGTGTTGATTTTTGGGAATGGTGAAGTTAAGATCGCGGATTTTGGGCTTGCTAAATCGGCTGGAAAATTTGGGGCGGTGGAAACAGAGGAGAGATTTGAATGGAGAGGGACTCCGATGTATATGTCGCCGGAGATTGTAAACGACGGTGAGTATGAGTCACCGTGTGATATTTGGGCGTTGGGTTGCGCCGTCGTGGAGATGGTGGTTGGAAAGCCGGCGTGGAGGGTCGGGCCGGGAACGGATATGTTTGGCTTGATGATGAGGATTGGAGTCGGAGATGAAGTACCGGAGACACCAGAGAATTTATCGGCGGAGGGGAAAGATTTTATCCGGCGGTGTTTTGTTAAGGATCCAAGTAAGAGATGGACGGCGGAGATGCTTTTGAATCACCCATTCGTTGTCGCCGGTGCCGGTGATACTACTGTTACATTGAAGGAAGTAGAATTGACAACGGAGTCACCCACGGGGCCTTTCGACTTCCCGGAATTCGTTTGTTCCGGCCAAGGTTCGGATGAGTGGAGTTTTTGTTCTTCTAGTTCGTCGCCGGAGGTGTTGAGTAGGGTCCGGCATCTGGTGACGGGGAAGCCTTTGGATTGGTCTGTCATGGATAGTTGGGTGACAGTTAGGTGA | 1041 | 47.84 | MEWVRGDQLGRGNFATISLAKLTKGFDQFPPLMAVKSSVSSLSSVSLKNEKQILDRIGVCPQIITCYGDGFSVEKDGDKYYNLFLEYANGGSLADVVRTHGGGLSEFDVRRYTRAILYGLRHVHGNGFVHCDLKLSNVLIFGNGEVKIADFGLAKSAGKFGAVETEERFEWRGTPMYMSPEIVNDGEYESPCDIWALGCAVVEMVVGKPAWRVGPGTDMFGLMMRIGVGDEVPETPENLSAEGKDFIRRCFVKDPSKRWTAEMLLNHPFVVAGAGDTTVTLKEVELTTESPTGPFDFPEFVCSGQGSDEWSFCSSSSSPEVLSRVRHLVTGKPLDWSVMDSWVTVR | 346 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3494281 | 3495321 | - | MELO3C020859.2.1 | Cme11g00336 | 340999 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme11g00336 | 346 | PANTHER | CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED | 1 | 323 | - | - | |
Cme11g00336 | 346 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 128 | 140 | IPR008271 | GO:0004672|GO:0006468 | |
Cme11g00336 | 346 | SUPERFAMILY | Protein kinase-like (PK-like) | 3 | 302 | IPR011009 | - | |
Cme11g00336 | 346 | Gene3D | Transferase(Phosphotransferase) domain 1 | 2 | 292 | - | - | |
Cme11g00336 | 346 | SMART | serkin_6 | 3 | 270 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cme11g00336 | 346 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 | 1 | 323 | - | - | |
Cme11g00336 | 346 | CDD | STKc_MAPKKK | 2 | 270 | - | - | |
Cme11g00336 | 346 | Pfam | Protein kinase domain | 5 | 270 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cme11g00336 | 346 | ProSiteProfiles | Protein kinase domain profile. | 3 | 270 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cme11g00336 | 346 | ProSitePatterns | Protein kinases ATP-binding region signature. | 9 | 36 | IPR017441 | GO:0005524 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme01g02532 | Cme-Chr1:33287824 | Cme11g00336 | Cme-Chr11:3494281 | 1.95E-58 | dispersed | |
Cme04g01934 | Cme-Chr4:27030465 | Cme11g00336 | Cme-Chr11:3494281 | 7.67E-54 | dispersed | |
Cme04g01997 | Cme-Chr4:27570620 | Cme11g00336 | Cme-Chr11:3494281 | 5.69E-06 | dispersed | |
Cme11g00336 | Cme-Chr11:3494281 | Cme11g00827 | Cme-Chr11:10812050 | 3.36E-60 | dispersed | |
Cme11g00336 | Cme-Chr11:3494281 | Cme08g00577 | Cme-Chr8:3655913 | 1.43E-131 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
65227 | PF00069 | Pkinase | 8.20E-53 | CL0016 | Cme | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme11g00336 | - | - | csv:101214756 | 632.484 |