Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme11g00342 | ATGGAAGCTAATATTTATGATCTTAAGGTGCCACTAAATCCAAGGGACCTCAATTATGAACACAGAATAATAGATACCATAGAAGCCGGAGGATTCCCCGCCGACGAATTTTCCGACCAAGCCATTACATCAACATGTCGTCTAAGAATCTCCCGAATCTTCTGTCCAGCCAAACTCCGATCTCTTCAAAAAACCCTAGCCATGGTCCACGGCGTAAAACGAGCAACCGTACATCTCGAATTCAAAGAAGCCAAAGTCCTGTTCGATCCAAATTTAACTACAGAAACCCTAATCCTCAAAGCAATCGCGGATATCGGCTTCGAAGCCGATCTCATCTCCGCCGGAGACGAAGCCTACATAGTTCACTTAAAACTGGATCGAGCCAGCCGCGGAGATATGGGCGCCATAAAATCCTCTCTGGAGCAAGCTGATGGAGTAACTTCAGTTGAAATGGAAGCGGTAGAGCGGATGGTGAAGGTGGGGTACGACCCTGATCGGACGGGTCCAAGATCGATATTGCAGTTCTTGAAGAAGTACGGAGCAAGGTTGTACGTGCCTCCAAAGAGAAGAGATGTGGAGCAGCATCAAGAAGCTTGTGCTTATAGGAATTTGTTCTTGTTTAGCTGCTTGTTTTCCGTTCCGGTAGTGGCTTTCGCAATGGTGCTTCCAATGCTTCCTCCTTATGGAGATTGGTTGAATTTTAGGGTTTGCAAGATGCTCACCATTGGAATGGTTCTTAAATGGATCTTCTGCACTCCAGTCCAGTTCCTTGCCGGTGGCAGATTTTATGTAGGATCGTACCGTGCATTACAACGAAAATCTGCAAATATGGATGTTTTGGTTGCTGTAGGCACCAATGCAGCTTACTTTTACTCGGTATACATAGTATTTAAAGCATCCACTTCCAACTCTTTTAAGGGGAAAGATTTCTTTGAGACTAGCTCCATATTGATATCCTTCATTCTACTTGGAAAATATTTGGAGGTCATGGCCAAAGGCAAATCATCTGATGCTTTAGGAAAGCTAGCTCATCTTGCTCCGGACACGGCTTGTTTGATGACCTTTGATGATAATGGAAGTTTGCTGTCGGAGGTGGAGATTGATACCCAACTCATACAGAGAAATGACATAATTAAGATTGTTCCGGGTGCAAAAGTTCCTGTTGATGGGATTGTTATTGGTGGTGAAAGTAATGTGAATGAGAGTACAATTACAGGAGAAGCAAGATCCATTGGCAAATCAACTGGAGATAAGGTTATTGGAGGAACTGTCAATGAGAATGGAATCTTGTTTGTTAAGACCACCCATGTTGGAACTGATACTACACTTTCTCGAATTGTACAACTAGTGGAATCAGCGCAGCTATCACGAGCACCAGCTCAAAAATTAGCAGATCAGATATCAAAGTTCTTTGTTCCTGTTGTTGTTGTGGCAGCATTTGTTACATGGGTTGGATGGTTAATTTGTGGAGAAATTGGTTTATACCCCAAACATTGGATACCAAAAGGCATGGATGAGTTCGAACTTGCACTGCAGTTTGCCATTTCAGTGCTGGTGATTGCATGCCCTTGTGCCCTTGGCTTAGCAACGCCGACTGCGATCATGGTTGCATCAGGAAAGAGTGCTTCTTTAGGCGTGCTCATTAAAGGGGCAAGTGCACTTCAAAATGCATACAAGGTGAAAACGGTAGTTTTTGACAAGACTGGAACTCTAACAGTTGGGAGGCCAGAGGTAGTTAGTGTTGTGCTTTTCTCTACATTTCCAATGCTGGAGGTTTGTGATGCAGCAATAGCAATTGAGTCAAACAGCGAACACCCTTTTGCAAAGCCTATAGTGGAGCATGCAAAGAAAATGAGAAAGAAGTTCGGGGCTCGAAGCGAATGTTCCAAACGCGTCCAGAACTTCGAGGTGTTCCCGGGAGGAGGGGTTGGAGGAAAAATTGATAGAAAGACAGTTTTAGTAGGAAACAAAAGGCTAATGCGAGTTCACAATGTTGATATTACTCCTCAAGTTGATCGGTATACCATAGAAAACGAGCGACTGGCTCAAACATGTGTCTTGGTAGCTATTGATGGCAAGATAGCTGGAGGTTTTGGCGTTTTGGATGCACCAAAGCCGGGTACTAAAGCTGTCATATCATTTCTTCGCTCGATTGGCATCTCAACCATAATGATCACTGGAGATAACTTGGCCACAGCCTTCGCCGTTGCAAGAGGGGTCGGGATTAATAAAGTCTTTGCAGAGATGGATCCAATTGAAAAGGCTAACCAGATTAGATCCTTAAAGTCGACAGGCAATATTGTGGCAATGGTGGGAGATGGAGTAAACGACTCACATGCCTTAGCTGCAGCTGATGTTGGTATTGCAATTGGTGCTGGAACCAATATTGCTATAGAAGCAGCTGATATTGTTCTAATGCGAAGCAATTTAGAAGATGTGGTTACTGCCATAGATCTCTCAAGACAAACAGTTTATCGTATATGGCTTAACTACATCTGGGCTCTTGGCTATAATATCATCGGCATGCCTATCGCTGCCGGAATCCTATATCCTTTCTTCGGAATCCGATTGCCACCGTGGCTTGCCGGTGCCTGCATGGCTGCTTCCTCCCTTAGTGTTGTA | 2622 | 44.28 | MEANIYDLKVPLNPRDLNYEHRIIDTIEAGGFPADEFSDQAITSTCRLRISRIFCPAKLRSLQKTLAMVHGVKRATVHLEFKEAKVLFDPNLTTETLILKAIADIGFEADLISAGDEAYIVHLKLDRASRGDMGAIKSSLEQADGVTSVEMEAVERMVKVGYDPDRTGPRSILQFLKKYGARLYVPPKRRDVEQHQEACAYRNLFLFSCLFSVPVVAFAMVLPMLPPYGDWLNFRVCKMLTIGMVLKWIFCTPVQFLAGGRFYVGSYRALQRKSANMDVLVAVGTNAAYFYSVYIVFKASTSNSFKGKDFFETSSILISFILLGKYLEVMAKGKSSDALGKLAHLAPDTACLMTFDDNGSLLSEVEIDTQLIQRNDIIKIVPGAKVPVDGIVIGGESNVNESTITGEARSIGKSTGDKVIGGTVNENGILFVKTTHVGTDTTLSRIVQLVESAQLSRAPAQKLADQISKFFVPVVVVAAFVTWVGWLICGEIGLYPKHWIPKGMDEFELALQFAISVLVIACPCALGLATPTAIMVASGKSASLGVLIKGASALQNAYKVKTVVFDKTGTLTVGRPEVVSVVLFSTFPMLEVCDAAIAIESNSEHPFAKPIVEHAKKMRKKFGARSECSKRVQNFEVFPGGGVGGKIDRKTVLVGNKRLMRVHNVDITPQVDRYTIENERLAQTCVLVAIDGKIAGGFGVLDAPKPGTKAVISFLRSIGISTIMITGDNLATAFAVARGVGINKVFAEMDPIEKANQIRSLKSTGNIVAMVGDGVNDSHALAAADVGIAIGAGTNIAIEAADIVLMRSNLEDVVTAIDLSRQTVYRIWLNYIWALGYNIIGMPIAAGILYPFFGIRLPPWLAGACMAASSLSVV | 874 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3550683 | 3561711 | - | MELO3C020853.2.1 | Cme11g00342 | 341005 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme11g00342 | 874 | ProSiteProfiles | Heavy-metal-associated domain profile. | 45 | 111 | IPR006121 | GO:0046872 | |
Cme11g00342 | 874 | Gene3D | - | 36 | 113 | - | - | |
Cme11g00342 | 874 | Gene3D | - | 332 | 454 | - | - | |
Cme11g00342 | 874 | Pfam | E1-E2 ATPase | 363 | 542 | - | - | |
Cme11g00342 | 874 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 317 | 848 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cme11g00342 | 874 | SUPERFAMILY | HMA, heavy metal-associated domain | 44 | 115 | IPR036163 | GO:0046872 | |
Cme11g00342 | 874 | SUPERFAMILY | Calcium ATPase, transduction domain A | 364 | 450 | IPR008250 | - | |
Cme11g00342 | 874 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 312 | 827 | IPR023298 | - | |
Cme11g00342 | 874 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 566 | 572 | IPR018303 | - | |
Cme11g00342 | 874 | SFLD | Haloacid Dehalogenase | 546 | 823 | - | - | |
Cme11g00342 | 874 | PANTHER | COPPER-TRANSPORTING ATPASE HMA4 | 18 | 874 | - | - | |
Cme11g00342 | 874 | Gene3D | - | 571 | 649 | IPR023299 | GO:0000166 | |
Cme11g00342 | 874 | Gene3D | - | 650 | 702 | IPR023299 | GO:0000166 | |
Cme11g00342 | 874 | PRINTS | P-type cation-transporting ATPase superfamily signature | 771 | 790 | - | - | |
Cme11g00342 | 874 | PRINTS | P-type cation-transporting ATPase superfamily signature | 564 | 578 | - | - | |
Cme11g00342 | 874 | PRINTS | P-type cation-transporting ATPase superfamily signature | 718 | 728 | - | - | |
Cme11g00342 | 874 | PRINTS | P-type cation-transporting ATPase superfamily signature | 400 | 414 | - | - | |
Cme11g00342 | 874 | PRINTS | P-type cation-transporting ATPase superfamily signature | 696 | 707 | - | - | |
Cme11g00342 | 874 | PRINTS | P-type cation-transporting ATPase superfamily signature | 794 | 806 | - | - | |
Cme11g00342 | 874 | Pfam | haloacid dehalogenase-like hydrolase | 560 | 785 | - | - | |
Cme11g00342 | 874 | SUPERFAMILY | HAD-like | 562 | 874 | IPR036412 | - | |
Cme11g00342 | 874 | SUPERFAMILY | HMA, heavy metal-associated domain | 132 | 185 | IPR036163 | GO:0046872 | |
Cme11g00342 | 874 | TIGRFAM | ATPase-IB_hvy: heavy metal translocating P-type ATPase | 277 | 874 | IPR027256 | GO:0006812|GO:0016021|GO:0019829 | |
Cme11g00342 | 874 | CDD | P-type_ATPase_Cu-like | 205 | 874 | - | - | |
Cme11g00342 | 874 | Gene3D | - | 531 | 827 | IPR023214 | - | |
Cme11g00342 | 874 | CDD | HMA | 48 | 109 | IPR006121 | GO:0046872 | |
Cme11g00342 | 874 | PANTHER | P-TYPE CATION-TRANSPORTING ATPASE | 18 | 874 | - | - | |
Cme11g00342 | 874 | SFLD | p-type atpase | 546 | 823 | IPR044492 | - | |
Cme11g00342 | 874 | PRINTS | Copper-transporting ATPase 1 signature | 260 | 285 | - | - | |
Cme11g00342 | 874 | PRINTS | Copper-transporting ATPase 1 signature | 71 | 94 | - | - | |
Cme11g00342 | 874 | PRINTS | Copper-transporting ATPase 1 signature | 240 | 260 | - | - | |
Cme11g00342 | 874 | PRINTS | Copper-transporting ATPase 1 signature | 205 | 226 | - | - | |
Cme11g00342 | 874 | PRINTS | Copper-transporting ATPase 1 signature | 45 | 70 | - | - | |
Cme11g00342 | 874 | PRINTS | Copper-transporting ATPase 1 signature | 100 | 120 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme09g01752 | Cme-Chr9:22014667 | Cme11g00342 | Cme-Chr11:3550683 | 0 | dispersed | |
Cme11g00342 | Cme-Chr11:3550683 | Cme11g00715 | Cme-Chr11:8588898 | 7.18E-47 | dispersed | |
Cme11g00342 | Cme-Chr11:3550683 | Cme02g01909 | Cme-Chr2:25521866 | 2.41E-19 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme11g00342 | K17686 | - | csv:101214276 | 1608.96 |