Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g00354 ATGAGAGGGATTAGTAGAATGGTCGTAAGCTCTTTTGTGGGTTTTGTTCTTGTTTTGACAACTTTGTTGGCGGTTGTTTCCACGACGGAGGCTCAGCTCCGACGAGATTTCTATGCCGATGTATGCCCTAATGTTGAGAGTATAGTTCGAAGCGCTGTGACGAAGAAGTTCAAACAAACGTTTGTTACTGTTCCTGCTACTGTTCGCCTCTTCTTCCATGATTGCTTTGTTCAGGGATGTGATGCGTCAGTGATGATCGCTTCAGATGGAAGCAACACGGCAGAGAAGGATCATCCTGATAATCTTTCGTTAGCCGGTGATGGATTCGATACTGTTATCAAAGCTAAAGCAGCAGTTGACGCTGTGCCGGGATGTAAAAACAAAGTCTCATGTGCTGATATTCTCGTCATGGCTACTCGAGATGTCATTTCATTGGCGAGAGGACCTTCATATGCAGTGGAGTTGGGAAGAAAAGATGGGCTTGTTTCCAGGGCTTCAGATGTCGAAGGAAAATTGCCTCAACCAACCTTTAATCTCAATCAACTTAATGCTATGTTTGCTGCCAATGGTCTTTCTCAAGCTGACATGATTGCTCTCTCTGCGGCACACACCGTAGGATTCTCCCATTGCAGTAAATTTGCAGATAGAATATACAATTTCAGTCGTACGAATCCAGTTGATCCAACGTTAAATCCGACATATGCAAAAAAGCTTCAAGAGATGTGTCCCAAAGATGTGGATCCAAGGATAGCCATTGACATGGATCCAAACACCCCTAGAAGGTTTGATAATATGTACTTCAAAAATCTCCAACAAGGAATGGGCCTTTTCACTTCTGACCAAATCCTCTTCACTGACCCAAGGTCTAGGTCCACTGTCAAGGTTTGGGCTCATAGTGGTCAAACCTTCTACAAAGCCTTCATTAATGCCATGACCAAGTTGGGTCGGGTCGGTGTCAAGACCGGATCCGATGGTAACATTCGTACTGACTGTGGTGTTTTCAACTCTTGA 1011 44.41 MRGISRMVVSSFVGFVLVLTTLLAVVSTTEAQLRRDFYADVCPNVESIVRSAVTKKFKQTFVTVPATVRLFFHDCFVQGCDASVMIASDGSNTAEKDHPDNLSLAGDGFDTVIKAKAAVDAVPGCKNKVSCADILVMATRDVISLARGPSYAVELGRKDGLVSRASDVEGKLPQPTFNLNQLNAMFAANGLSQADMIALSAAHTVGFSHCSKFADRIYNFSRTNPVDPTLNPTYAKKLQEMCPKDVDPRIAIDMDPNTPRRFDNMYFKNLQQGMGLFTSDQILFTDPRSRSTVKVWAHSGQTFYKAFINAMTKLGRVGVKTGSDGNIRTDCGVFNS 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3632127 3634509 - MELO3C020841.2.1 Cme11g00354 341017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g00354 336 PRINTS Plant peroxidase signature 42 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g00354 336 PRINTS Plant peroxidase signature 66 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g00354 336 PRINTS Plant peroxidase signature 107 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g00354 336 PRINTS Plant peroxidase signature 128 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g00354 336 PRINTS Plant peroxidase signature 147 162 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g00354 336 PRINTS Plant peroxidase signature 194 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g00354 336 PRINTS Plant peroxidase signature 253 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g00354 336 PRINTS Plant peroxidase signature 269 286 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g00354 336 PRINTS Plant peroxidase signature 309 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g00354 336 CDD secretory_peroxidase 32 334 IPR033905 GO:0004601|GO:0042744
Cme11g00354 336 PANTHER - 14 335 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g00354 336 PANTHER PEROXIDASE 14 335 - -
Cme11g00354 336 Gene3D - 36 335 - -
Cme11g00354 336 ProSitePatterns Peroxidases proximal heme-ligand signature. 195 205 IPR019793 -
Cme11g00354 336 SUPERFAMILY Heme-dependent peroxidases 32 335 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cme11g00354 336 Pfam Peroxidase 49 298 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g00354 336 PRINTS Haem peroxidase superfamily signature 64 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g00354 336 PRINTS Haem peroxidase superfamily signature 129 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g00354 336 PRINTS Haem peroxidase superfamily signature 147 159 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g00354 336 PRINTS Haem peroxidase superfamily signature 195 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g00354 336 PRINTS Haem peroxidase superfamily signature 255 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g00354 336 Gene3D Peroxidase, domain 2 173 314 - -
Cme11g00354 336 ProSiteProfiles Plant heme peroxidase family profile. 32 335 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g00354 336 ProSitePatterns Peroxidases active site signature. 64 75 IPR019794 GO:0004601
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme08g00607 Cme11g00354 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g00129 Cme-Chr3:1748650 Cme11g00354 Cme-Chr11:3632127 5.12E-151 dispersed
Cme03g00130 Cme-Chr3:1748680 Cme11g00354 Cme-Chr11:3632127 5.12E-151 dispersed
Cme04g00339 Cme-Chr4:2709196 Cme11g00354 Cme-Chr11:3632127 6.32E-125 dispersed
Cme08g00634 Cme-Chr8:4094550 Cme11g00354 Cme-Chr11:3632127 0 dispersed
Cme09g00334 Cme-Chr9:2836544 Cme11g00354 Cme-Chr11:3632127 8.46E-99 dispersed
Cme11g00354 Cme-Chr11:3632127 Cme12g01717 Cme-Chr12:23962345 1.22E-97 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g00354 K00430 - csv:101208254 620.157