Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme11g00354 | ATGAGAGGGATTAGTAGAATGGTCGTAAGCTCTTTTGTGGGTTTTGTTCTTGTTTTGACAACTTTGTTGGCGGTTGTTTCCACGACGGAGGCTCAGCTCCGACGAGATTTCTATGCCGATGTATGCCCTAATGTTGAGAGTATAGTTCGAAGCGCTGTGACGAAGAAGTTCAAACAAACGTTTGTTACTGTTCCTGCTACTGTTCGCCTCTTCTTCCATGATTGCTTTGTTCAGGGATGTGATGCGTCAGTGATGATCGCTTCAGATGGAAGCAACACGGCAGAGAAGGATCATCCTGATAATCTTTCGTTAGCCGGTGATGGATTCGATACTGTTATCAAAGCTAAAGCAGCAGTTGACGCTGTGCCGGGATGTAAAAACAAAGTCTCATGTGCTGATATTCTCGTCATGGCTACTCGAGATGTCATTTCATTGGCGAGAGGACCTTCATATGCAGTGGAGTTGGGAAGAAAAGATGGGCTTGTTTCCAGGGCTTCAGATGTCGAAGGAAAATTGCCTCAACCAACCTTTAATCTCAATCAACTTAATGCTATGTTTGCTGCCAATGGTCTTTCTCAAGCTGACATGATTGCTCTCTCTGCGGCACACACCGTAGGATTCTCCCATTGCAGTAAATTTGCAGATAGAATATACAATTTCAGTCGTACGAATCCAGTTGATCCAACGTTAAATCCGACATATGCAAAAAAGCTTCAAGAGATGTGTCCCAAAGATGTGGATCCAAGGATAGCCATTGACATGGATCCAAACACCCCTAGAAGGTTTGATAATATGTACTTCAAAAATCTCCAACAAGGAATGGGCCTTTTCACTTCTGACCAAATCCTCTTCACTGACCCAAGGTCTAGGTCCACTGTCAAGGTTTGGGCTCATAGTGGTCAAACCTTCTACAAAGCCTTCATTAATGCCATGACCAAGTTGGGTCGGGTCGGTGTCAAGACCGGATCCGATGGTAACATTCGTACTGACTGTGGTGTTTTCAACTCTTGA | 1011 | 44.41 | MRGISRMVVSSFVGFVLVLTTLLAVVSTTEAQLRRDFYADVCPNVESIVRSAVTKKFKQTFVTVPATVRLFFHDCFVQGCDASVMIASDGSNTAEKDHPDNLSLAGDGFDTVIKAKAAVDAVPGCKNKVSCADILVMATRDVISLARGPSYAVELGRKDGLVSRASDVEGKLPQPTFNLNQLNAMFAANGLSQADMIALSAAHTVGFSHCSKFADRIYNFSRTNPVDPTLNPTYAKKLQEMCPKDVDPRIAIDMDPNTPRRFDNMYFKNLQQGMGLFTSDQILFTDPRSRSTVKVWAHSGQTFYKAFINAMTKLGRVGVKTGSDGNIRTDCGVFNS | 336 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3632127 | 3634509 | - | MELO3C020841.2.1 | Cme11g00354 | 341017 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme11g00354 | 336 | PRINTS | Plant peroxidase signature | 42 | 61 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme11g00354 | 336 | PRINTS | Plant peroxidase signature | 66 | 86 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme11g00354 | 336 | PRINTS | Plant peroxidase signature | 107 | 120 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme11g00354 | 336 | PRINTS | Plant peroxidase signature | 128 | 138 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme11g00354 | 336 | PRINTS | Plant peroxidase signature | 147 | 162 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme11g00354 | 336 | PRINTS | Plant peroxidase signature | 194 | 206 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme11g00354 | 336 | PRINTS | Plant peroxidase signature | 253 | 268 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme11g00354 | 336 | PRINTS | Plant peroxidase signature | 269 | 286 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme11g00354 | 336 | PRINTS | Plant peroxidase signature | 309 | 322 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme11g00354 | 336 | CDD | secretory_peroxidase | 32 | 334 | IPR033905 | GO:0004601|GO:0042744 | |
Cme11g00354 | 336 | PANTHER | - | 14 | 335 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme11g00354 | 336 | PANTHER | PEROXIDASE | 14 | 335 | - | - | |
Cme11g00354 | 336 | Gene3D | - | 36 | 335 | - | - | |
Cme11g00354 | 336 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 195 | 205 | IPR019793 | - | |
Cme11g00354 | 336 | SUPERFAMILY | Heme-dependent peroxidases | 32 | 335 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cme11g00354 | 336 | Pfam | Peroxidase | 49 | 298 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme11g00354 | 336 | PRINTS | Haem peroxidase superfamily signature | 64 | 78 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme11g00354 | 336 | PRINTS | Haem peroxidase superfamily signature | 129 | 146 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme11g00354 | 336 | PRINTS | Haem peroxidase superfamily signature | 147 | 159 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme11g00354 | 336 | PRINTS | Haem peroxidase superfamily signature | 195 | 210 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme11g00354 | 336 | PRINTS | Haem peroxidase superfamily signature | 255 | 270 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme11g00354 | 336 | Gene3D | Peroxidase, domain 2 | 173 | 314 | - | - | |
Cme11g00354 | 336 | ProSiteProfiles | Plant heme peroxidase family profile. | 32 | 335 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme11g00354 | 336 | ProSitePatterns | Peroxidases active site signature. | 64 | 75 | IPR019794 | GO:0004601 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cme08g00607 | Cme11g00354 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme03g00129 | Cme-Chr3:1748650 | Cme11g00354 | Cme-Chr11:3632127 | 5.12E-151 | dispersed | |
Cme03g00130 | Cme-Chr3:1748680 | Cme11g00354 | Cme-Chr11:3632127 | 5.12E-151 | dispersed | |
Cme04g00339 | Cme-Chr4:2709196 | Cme11g00354 | Cme-Chr11:3632127 | 6.32E-125 | dispersed | |
Cme08g00634 | Cme-Chr8:4094550 | Cme11g00354 | Cme-Chr11:3632127 | 0 | dispersed | |
Cme09g00334 | Cme-Chr9:2836544 | Cme11g00354 | Cme-Chr11:3632127 | 8.46E-99 | dispersed | |
Cme11g00354 | Cme-Chr11:3632127 | Cme12g01717 | Cme-Chr12:23962345 | 1.22E-97 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme11g00354 | K00430 | - | csv:101208254 | 620.157 |