Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g00355 ATGAAATTAGCTCATCGTCGTTTGAGTTTCTTCTTCATTTCGTTTCTTCCTTTATTCTTTACATTCTTTACTGCCACAGCTTTAACGTTTGATTCCTACATTTCCTACCGGAGAATTCTGCATCAGCCGCTTTTTCCTATTGGCTCTGAGCCACCGCCGGAGATTGAATTCTCTCCACCTCCACCACCTCCACCGGATTCTCCCGCCGATGATCAACCATTTTTCCATGAGCTACCGACGAGTCCAGATCAGAGTCAACCGCCTCCTTCCTCCAGTAATGGAACTATGCCTATACCGGCTGCTACGGCGCAGCCGTCTAAGCCTACCAAGACTGTTGCGATTGCCATTTCGGTTGGGATTGTGACTTTGGGGATGCTTTCGGCTCTTGCGTTCTTTTTGTATCGTCATCGTGCGAAGCATCCTGGGGAGTCGCAGAAGCTTGTTGGAGGGAGTAATAATCCGGAGAGATTTATGGAGGATTCGAGAGCGCCTCCTTCGAGTTTTTTTTATATTGGAACTGTTGAGCCGAGTCAGAGCTCTGTTGTGGAGCAGAATGGTGCTAATGGTGCGAATAGTTCGCCTTATCGGAAGCTGAATTCGATTAAGAGGTCGGATCGGTATCGTCCGAGTCCGGAGTTGCAGCCACTACCGCCTTTGCCTAAACCGCCGGTGGTTATGTCGCCTCCGGCTTTGTCATCTTCTGATGAGGAGAGTCTGGATACGGCATTTCATACTCCGCAATGCTCGTCGATTGTTAGTCATGAGGATGGCTATTTTTCACCGGCTTCTCGTCGGAGTAATTCGGTTAAGAGCTGTTCAACGGCGACTTATAAGAATGACCATATCAATTCCAATCCCCCTCCTCCCATCCCGCATTCCAAAAGAACCTCTCCTAAATCGAGATTTTCGGTTTCTTCGACGAAGCGTAATTCGTCTCAGCCTCAGCCACCGCCACCGCCGCCTCCTCCACCGCGTTCGTTTGATGATATTCGTGCTACTCCGAATTCGAAAGAAACAATGCCCTTCTCTGCCACGAGACCTAGATTTTCGAAGCCTCCTCCCCCGCCGAATTTGGCGCTTCTTCAAACAATTAGCAATTCAGCTACATTTCCTCAAGTTCCGCAACCTGCTGGAGCTCCACCTCCGCCTCCCCCTCCGCCGCCTCCTCCCCCACCTCCACCTCCACGGCCGACGGCGCATCCGGCCTCTTATTCAACACCACAAAAACTAGGGTTATCAGAAAACAGAATGTCGGCAGTCACTCCTCCAGACTCCTCTAAATCACAATCCTACTCAACAGCGAGATCAAACTCATCTCCGAAATCCACACCGAGTTCTACGGCAACAAATTCTGCTAAAGAAGACGCTGTCCTAAGCACTAATTCTATGGAGAGGCTGGAAGCAGAAGATGCAGATGGTGCAAAACCGAGATTGAAGCCCTTGCACTGGGACAAAGTACGAGCAACATCAGACCGAGCTACAGTCTGGGATCAACTTAAATCAAGCTCATTCCAATTAAACGAGGATATGATGGAGACACTTTTCGGCTTCAATTCTGCAAATTCTGTTCCCAAAGAAGCCACGAGAAAGTCTGTTCTTCCCCCCGTTGAGAAGGAAAACAGGGTATTAGACCCAAAAAAATCGCAGAACATAGCAATACTTCTAAGAGCACTTAATGTCACGCGTGATGAAGTGATCGAAGCTCTTCAAGATGGTAACCCAGAAGGCTTTGGTACTGAGCTCTTAGAAACTCTTGTAAAGATGGCTCCAACCAAAGAGGAAGAGATAAAACTTAGAGAGTACTGTGGTGATGCTTCAAAATTAGGGACTGCCGAAAGATTTCTCAAGGCAGTGCTTGAAGTTCCATTTGCCTTTAGAAGAGTTGAGGCAATGCTGTACAGAGCCAATTTTGATTCAGAAGTAAAGTACCTGAGAAAATCTTTCCAAACCCTTGAGGGTGCAAGTGAAGAATTAAAGAACAGTAGACTTTTTCTTAAACTCCTTGAAGCAGTTCTCAAGACAGGAAATAGGATGAATGTTGGTACGAATCGCGGTGATGCTAAAGCCTTTAAGCTTGAAACCCTCTTAAAATTAGTAGATATAAAGGGCACAGATGGAAAAACAACATTGCTTCATTTTGTTGTTCAAGAAATCATCAGATCAGAAGGTGGTGCTGATTCAACTAATGACAACCTTCAACCCCGTTCGCAAGCTAAAATCGAGGATGAATTCAGAAAGCAGGGCTTGCAAGTTGTGGCTGGACTAAGCAGAGACCTCACCAATGTCAAAAAAGCAGCAGGGATGGACTCAGACGTCTTGAGCAGTTATGTCACAAAGCTCGAAATGGGGCTCGAAAAAGTAAGGTTGGTCTTACAATTCGAAAAGCCTGGAATGCAGGGAAAATTCTTCAACTCAATGAAAACATTCTTGAAAGAGGCAGAAGAGGAAATAGTCAGGATCAAGGCTGATGAAAGACAAGCTTTATCGCTCGTGAAAGCAGTGACCGAGTATTTCCATGGCGATGCAGCTAAGGAAGAAGCCCACCCCTTCCGAATCTTCATGATCGTTCGGGATTTCCTAACCATACTCGATCAAGTATGCAAAGAAGTCGGGAGAATGCAGGATGGAGTAATGGTGGGTGCTGCTAGATCCTTTCGAATATCCGCTACAGCCTCACTCCCAGTCCTCAGCAGGTATAATGTCAGACACGACCGAAGCTCCGACGAGGATAGCTCATCTCCATGA 2745 46.89 MKLAHRRLSFFFISFLPLFFTFFTATALTFDSYISYRRILHQPLFPIGSEPPPEIEFSPPPPPPPDSPADDQPFFHELPTSPDQSQPPPSSSNGTMPIPAATAQPSKPTKTVAIAISVGIVTLGMLSALAFFLYRHRAKHPGESQKLVGGSNNPERFMEDSRAPPSSFFYIGTVEPSQSSVVEQNGANGANSSPYRKLNSIKRSDRYRPSPELQPLPPLPKPPVVMSPPALSSSDEESLDTAFHTPQCSSIVSHEDGYFSPASRRSNSVKSCSTATYKNDHINSNPPPPIPHSKRTSPKSRFSVSSTKRNSSQPQPPPPPPPPPRSFDDIRATPNSKETMPFSATRPRFSKPPPPPNLALLQTISNSATFPQVPQPAGAPPPPPPPPPPPPPPPPRPTAHPASYSTPQKLGLSENRMSAVTPPDSSKSQSYSTARSNSSPKSTPSSTATNSAKEDAVLSTNSMERLEAEDADGAKPRLKPLHWDKVRATSDRATVWDQLKSSSFQLNEDMMETLFGFNSANSVPKEATRKSVLPPVEKENRVLDPKKSQNIAILLRALNVTRDEVIEALQDGNPEGFGTELLETLVKMAPTKEEEIKLREYCGDASKLGTAERFLKAVLEVPFAFRRVEAMLYRANFDSEVKYLRKSFQTLEGASEELKNSRLFLKLLEAVLKTGNRMNVGTNRGDAKAFKLETLLKLVDIKGTDGKTTLLHFVVQEIIRSEGGADSTNDNLQPRSQAKIEDEFRKQGLQVVAGLSRDLTNVKKAAGMDSDVLSSYVTKLEMGLEKVRLVLQFEKPGMQGKFFNSMKTFLKEAEEEIVRIKADERQALSLVKAVTEYFHGDAAKEEAHPFRIFMIVRDFLTILDQVCKEVGRMQDGVMVGAARSFRISATASLPVLSRYNVRHDRSSDEDSSSP 914
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3644288 3649162 - MELO3C020840.2.1 Cme11g00355 341018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g00355 914 MobiDBLite consensus disorder prediction 183 198 - -
Cme11g00355 914 MobiDBLite consensus disorder prediction 87 105 - -
Cme11g00355 914 SUPERFAMILY Formin homology 2 domain (FH2 domain) 384 874 - -
Cme11g00355 914 MobiDBLite consensus disorder prediction 142 164 - -
Cme11g00355 914 MobiDBLite consensus disorder prediction 402 458 - -
Cme11g00355 914 MobiDBLite consensus disorder prediction 50 105 - -
Cme11g00355 914 ProSiteProfiles Formin homology-2 (FH2) domain profile. 468 889 IPR015425 -
Cme11g00355 914 PANTHER FORMIN-RELATED 18 914 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Cme11g00355 914 MobiDBLite consensus disorder prediction 50 70 - -
Cme11g00355 914 MobiDBLite consensus disorder prediction 296 311 - -
Cme11g00355 914 Gene3D Formin, FH2 domain 462 874 IPR042201 -
Cme11g00355 914 Pfam Formin Homology 2 Domain 472 863 IPR015425 -
Cme11g00355 914 PANTHER FORMIN-LIKE PROTEIN 6 18 914 - -
Cme11g00355 914 MobiDBLite consensus disorder prediction 211 227 - -
Cme11g00355 914 MobiDBLite consensus disorder prediction 374 401 - -
Cme11g00355 914 Coils Coil 810 830 - -
Cme11g00355 914 MobiDBLite consensus disorder prediction 183 474 - -
Cme11g00355 914 MobiDBLite consensus disorder prediction 231 283 - -
Cme11g00355 914 SMART it6_source 468 878 IPR015425 -
Cme11g00355 914 MobiDBLite consensus disorder prediction 312 328 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g00799 Cme-Chr4:9745980 Cme11g00355 Cme-Chr11:3644288 2.62E-121 dispersed
Cme08g00643 Cme-Chr8:4170206 Cme11g00355 Cme-Chr11:3644288 1.00E-25 dispersed
Cme10g00485 Cme-Chr10:3114817 Cme11g00355 Cme-Chr11:3644288 5.93E-95 dispersed
Cme10g01384 Cme-Chr10:16051357 Cme11g00355 Cme-Chr11:3644288 5.09E-173 dispersed
Cme11g00355 Cme-Chr11:3644288 Cme12g01971 Cme-Chr12:25543931 1.35E-27 dispersed
Cme11g00755 Cme-Chr11:9402842 Cme11g00355 Cme-Chr11:3644288 5.24E-21 dispersed
Cme11g00355 Cme-Chr11:3644288 Cme02g01069 Cme-Chr2:15699961 3.18E-33 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g00355 - - cmo:103497354 1538.47