Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme11g00367 | ATGTTCTCAGAGTTGATGAACTTTCTGAGAGCTTGTTTTCGACCGAGGTCGGATCGACATGTACACAAGGGTTCCGATGCTGGTGGTCGACAGGATGGTCTCCTATGGTACAAAGATAGTGGGCAGCATGCCAATGGTGAGTTTTCAATGGCTGTAGTTCAGGCTAACAATTTACTTGAGGATCAAAGCCAGATGGAGTCGGGCAATTTGAGCTTGCACGAGGCCGGGCCATATGGTACTTTTGTTGGTGTATATGATGGGCATGGAGGGCCCGAGACATCTCGTTATGTAAATGATCACCTTTTCCAGCATCTTAAAAGGTTTACTTCAGAGCAACAATCCATGTCAGTGGATGTCATACGGAAGGCATTTCAAGCTACTGAAGAGGGGGTCATTGCTCAAGTTTCGAAACAATGGTCAATGAGGCCACAAATTGCAGCTGTTGGATCTTGCTGCCTTGTCGGTGTAATTTGTGGAGGAACCCTTTACATTGCCAACCTTGGCGATTCACGAGCTGTTTTAGGGAGAGTTGTAAAAGCGACAGGGGAAGTTTTGTCTGTTCAGTTGTCGGCTGAGCATAATGCATCTATAGAGTCTGTGAGGCAGGAGCTCCGTGCCCTGCATCCTGATGATCCACAGATTGTAGTCTTGAAGCATAATGTATGGCGCGTTAAGGGCCTGATACAGGTTTCTCGATCTATTGGTGATGTCTATTTAAAGAGAGCTGAGTTTAACCGAGAGCCTCTTTATGCTAAGTTTCGCCTTCGTGAACCTATCAAAAAGCCCATACTGAGCGCCGAACCATCTATTTCAGTGCTCCAATTGCAGCCACAGGATCAATTTATTATATTTGCTTCAGATGGGCTCTGGGAACACCTTAGCAATCAGGAAGCTGTTGATATTGTCCAAAACCATCCACGTAATGGAAGTGCAAGGAGGCTGGTGAAAGCAGCACTACAAGAAGCAGCAAAGAAGAGAGAAATGAGATACTCAGATTTGAAGAAGATTGACCGGGGAGTACGGCGACATTTCCACGATGACATCACAGTGATTGTTGTTTTTCTCGACTCAAACCTTGTGAGCCGAGCTAGCTCTACAAAATGTGCAAGCCTATCAGTGCGAGGGGGTGGAGTTAACTTACGTCCAAACTCATTGGCCCCCTGCACCACACCATCAGACACTGGCATGGCCTGA | 1194 | 46.65 | MFSELMNFLRACFRPRSDRHVHKGSDAGGRQDGLLWYKDSGQHANGEFSMAVVQANNLLEDQSQMESGNLSLHEAGPYGTFVGVYDGHGGPETSRYVNDHLFQHLKRFTSEQQSMSVDVIRKAFQATEEGVIAQVSKQWSMRPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLSVQLSAEHNASIESVRQELRALHPDDPQIVVLKHNVWRVKGLIQVSRSIGDVYLKRAEFNREPLYAKFRLREPIKKPILSAEPSISVLQLQPQDQFIIFASDGLWEHLSNQEAVDIVQNHPRNGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSNLVSRASSTKCASLSVRGGGVNLRPNSLAPCTTPSDTGMA | 397 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3727600 | 3731542 | - | MELO3C020829.2.1 | Cme11g00367 | 341030 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme11g00367 | 397 | SMART | PP2C_4 | 39 | 353 | IPR001932 | - | |
Cme11g00367 | 397 | Gene3D | - | 36 | 367 | IPR036457 | - | |
Cme11g00367 | 397 | ProSitePatterns | PPM-type phosphatase domain signature. | 81 | 89 | IPR000222 | GO:0043169 | |
Cme11g00367 | 397 | PANTHER | PROTEIN PHOSPHATASE 2C FAMILY PROTEIN | 5 | 387 | - | - | |
Cme11g00367 | 397 | SUPERFAMILY | PP2C-like | 59 | 356 | IPR036457 | - | |
Cme11g00367 | 397 | Pfam | Protein phosphatase 2C | 79 | 324 | IPR001932 | - | |
Cme11g00367 | 397 | CDD | PP2Cc | 48 | 355 | IPR001932 | - | |
Cme11g00367 | 397 | ProSiteProfiles | PPM-type phosphatase domain profile. | 47 | 355 | IPR001932 | - | |
Cme11g00367 | 397 | PANTHER | ALPHABET, ISOFORM E-RELATED | 5 | 387 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cme01g01240 | Cme11g00367 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme04g02578 | Cme-Chr4:31839963 | Cme11g00367 | Cme-Chr11:3727600 | 0 | dispersed | |
Cme06g02359 | Cme-Chr6:30882718 | Cme11g00367 | Cme-Chr11:3727600 | 0 | dispersed | |
Cme08g00965 | Cme-Chr8:6344338 | Cme11g00367 | Cme-Chr11:3727600 | 0 | dispersed | |
Cme10g00833 | Cme-Chr10:5527150 | Cme11g00367 | Cme-Chr11:3727600 | 0 | dispersed | |
Cme01g00108 | Cme-Chr1:745087 | Cme11g00367 | Cme-Chr11:3727600 | 1.56E-144 | transposed | |
Cme04g02241 | Cme-Chr4:29542684 | Cme11g00367 | Cme-Chr11:3727600 | 1.44E-150 | transposed | |
Cme11g02086 | Cme-Chr11:28515753 | Cme11g00367 | Cme-Chr11:3727600 | 2.99E-158 | transposed | |
Cme01g01240 | Cme-Chr1:15763954 | Cme11g00367 | Cme-Chr11:3727600 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme11g00367 | - | - | csv:101221640 | 787.719 |